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Assessing the health estimation capacity of air pollution exposure prediction models
BACKGROUND: The era of big data has enabled sophisticated models to predict air pollution concentrations over space and time. Historically these models have been evaluated using overall metrics that measure how close predictions are to monitoring data. However, overall methods are not designed to di...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928613/ https://www.ncbi.nlm.nih.gov/pubmed/35300698 http://dx.doi.org/10.1186/s12940-022-00844-0 |
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author | Krall, Jenna R. Keller, Joshua P. Peng, Roger D. |
author_facet | Krall, Jenna R. Keller, Joshua P. Peng, Roger D. |
author_sort | Krall, Jenna R. |
collection | PubMed |
description | BACKGROUND: The era of big data has enabled sophisticated models to predict air pollution concentrations over space and time. Historically these models have been evaluated using overall metrics that measure how close predictions are to monitoring data. However, overall methods are not designed to distinguish error at timescales most relevant for epidemiologic studies, such as day-to-day errors that impact studies of short-term health associations. METHODS: We introduce frequency band model performance, which quantifies health estimation capacity of air quality prediction models for time series studies of air pollution and health. Frequency band model performance uses a discrete Fourier transform to evaluate prediction models at timescales of interest. We simulated fine particulate matter (PM(2.5)), with errors at timescales varying from acute to seasonal, and health time series data. To compare evaluation approaches, we use correlations and root mean squared error (RMSE). Additionally, we assess health estimation capacity through bias and RMSE in estimated health associations. We apply frequency band model performance to PM(2.5) predictions at 17 monitors in 8 US cities. RESULTS: In simulations, frequency band model performance rates predictions better (lower RMSE, higher correlation) when there is no error at a particular timescale (e.g., acute) and worse when error is added to that timescale, compared to overall approaches. Further, frequency band model performance is more strongly associated (R(2) = 0.95) with health association bias compared to overall approaches (R(2) = 0.57). For PM(2.5) predictions in Salt Lake City, UT, frequency band model performance better identifies acute error that may impact estimated short-term health associations. CONCLUSIONS: For epidemiologic studies, frequency band model performance provides an improvement over existing approaches because it evaluates models at the timescale of interest and is more strongly associated with bias in estimated health associations. Evaluating prediction models at timescales relevant for health studies is critical to determining whether model error will impact estimated health associations. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12940-022-00844-0. |
format | Online Article Text |
id | pubmed-8928613 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-89286132022-03-23 Assessing the health estimation capacity of air pollution exposure prediction models Krall, Jenna R. Keller, Joshua P. Peng, Roger D. Environ Health Research BACKGROUND: The era of big data has enabled sophisticated models to predict air pollution concentrations over space and time. Historically these models have been evaluated using overall metrics that measure how close predictions are to monitoring data. However, overall methods are not designed to distinguish error at timescales most relevant for epidemiologic studies, such as day-to-day errors that impact studies of short-term health associations. METHODS: We introduce frequency band model performance, which quantifies health estimation capacity of air quality prediction models for time series studies of air pollution and health. Frequency band model performance uses a discrete Fourier transform to evaluate prediction models at timescales of interest. We simulated fine particulate matter (PM(2.5)), with errors at timescales varying from acute to seasonal, and health time series data. To compare evaluation approaches, we use correlations and root mean squared error (RMSE). Additionally, we assess health estimation capacity through bias and RMSE in estimated health associations. We apply frequency band model performance to PM(2.5) predictions at 17 monitors in 8 US cities. RESULTS: In simulations, frequency band model performance rates predictions better (lower RMSE, higher correlation) when there is no error at a particular timescale (e.g., acute) and worse when error is added to that timescale, compared to overall approaches. Further, frequency band model performance is more strongly associated (R(2) = 0.95) with health association bias compared to overall approaches (R(2) = 0.57). For PM(2.5) predictions in Salt Lake City, UT, frequency band model performance better identifies acute error that may impact estimated short-term health associations. CONCLUSIONS: For epidemiologic studies, frequency band model performance provides an improvement over existing approaches because it evaluates models at the timescale of interest and is more strongly associated with bias in estimated health associations. Evaluating prediction models at timescales relevant for health studies is critical to determining whether model error will impact estimated health associations. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12940-022-00844-0. BioMed Central 2022-03-17 /pmc/articles/PMC8928613/ /pubmed/35300698 http://dx.doi.org/10.1186/s12940-022-00844-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Krall, Jenna R. Keller, Joshua P. Peng, Roger D. Assessing the health estimation capacity of air pollution exposure prediction models |
title | Assessing the health estimation capacity of air pollution exposure prediction models |
title_full | Assessing the health estimation capacity of air pollution exposure prediction models |
title_fullStr | Assessing the health estimation capacity of air pollution exposure prediction models |
title_full_unstemmed | Assessing the health estimation capacity of air pollution exposure prediction models |
title_short | Assessing the health estimation capacity of air pollution exposure prediction models |
title_sort | assessing the health estimation capacity of air pollution exposure prediction models |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928613/ https://www.ncbi.nlm.nih.gov/pubmed/35300698 http://dx.doi.org/10.1186/s12940-022-00844-0 |
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