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Transcriptome Sequencing-Based Mining of Genes Associated With Pubertal Initiation in Dolang Sheep

Improving the fertility of sheep is an important goal in sheep breeding as it greatly increases the productivity. Dolang sheep is a typical representative breed of lamb in Xinjiang and is the main local sheep breed and meat source in the region. To explore the genes associated with the initiation of...

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Autores principales: Zhang, Zhishuai, Sui, Zhiyuan, Zhang, Jihu, Li, Qingjin, Zhang, Yongjie, Xing, Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928774/
https://www.ncbi.nlm.nih.gov/pubmed/35309120
http://dx.doi.org/10.3389/fgene.2022.818810
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author Zhang, Zhishuai
Sui, Zhiyuan
Zhang, Jihu
Li, Qingjin
Zhang, Yongjie
Xing, Feng
author_facet Zhang, Zhishuai
Sui, Zhiyuan
Zhang, Jihu
Li, Qingjin
Zhang, Yongjie
Xing, Feng
author_sort Zhang, Zhishuai
collection PubMed
description Improving the fertility of sheep is an important goal in sheep breeding as it greatly increases the productivity. Dolang sheep is a typical representative breed of lamb in Xinjiang and is the main local sheep breed and meat source in the region. To explore the genes associated with the initiation of puberty in Dolang sheep, the hypothalamic tissues of Dolang sheep prepubertal, pubertal, and postpubertal periods were collected for RNA-seq analysis on the Illumina platform, generating 64.08 Gb clean reads. A total of 575, 166, and 648 differentially expressed genes (DEGs) were detected in prepuberty_vs._puberty, postpuberty_vs._prepuberty, and postpuberty_vs._puberty analyses, respectively. Based on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, the related genes involved in the initiation of puberty in Dolang sheep were mined. Ten genes that have direct or indirect functions in the initiation of puberty in Dolang sheep were screened using the GO and KEGG results. Additionally, quantitative real-time PCR was used to verify the reliability of the RNA-Seq data. This study provided a new approach for revealing the mechanism of puberty initiation in sheep and provided a theoretical basis and candidate genes for the breeding of early-pubertal sheep by molecular techniques, and at the same time, it is also beneficial for the protection, development, and utilization of the fine genetic resources of Xinjiang local sheep.
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spelling pubmed-89287742022-03-18 Transcriptome Sequencing-Based Mining of Genes Associated With Pubertal Initiation in Dolang Sheep Zhang, Zhishuai Sui, Zhiyuan Zhang, Jihu Li, Qingjin Zhang, Yongjie Xing, Feng Front Genet Genetics Improving the fertility of sheep is an important goal in sheep breeding as it greatly increases the productivity. Dolang sheep is a typical representative breed of lamb in Xinjiang and is the main local sheep breed and meat source in the region. To explore the genes associated with the initiation of puberty in Dolang sheep, the hypothalamic tissues of Dolang sheep prepubertal, pubertal, and postpubertal periods were collected for RNA-seq analysis on the Illumina platform, generating 64.08 Gb clean reads. A total of 575, 166, and 648 differentially expressed genes (DEGs) were detected in prepuberty_vs._puberty, postpuberty_vs._prepuberty, and postpuberty_vs._puberty analyses, respectively. Based on Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses, the related genes involved in the initiation of puberty in Dolang sheep were mined. Ten genes that have direct or indirect functions in the initiation of puberty in Dolang sheep were screened using the GO and KEGG results. Additionally, quantitative real-time PCR was used to verify the reliability of the RNA-Seq data. This study provided a new approach for revealing the mechanism of puberty initiation in sheep and provided a theoretical basis and candidate genes for the breeding of early-pubertal sheep by molecular techniques, and at the same time, it is also beneficial for the protection, development, and utilization of the fine genetic resources of Xinjiang local sheep. Frontiers Media S.A. 2022-03-03 /pmc/articles/PMC8928774/ /pubmed/35309120 http://dx.doi.org/10.3389/fgene.2022.818810 Text en Copyright © 2022 Zhang, Sui, Zhang, Li, Zhang and Xing. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Zhang, Zhishuai
Sui, Zhiyuan
Zhang, Jihu
Li, Qingjin
Zhang, Yongjie
Xing, Feng
Transcriptome Sequencing-Based Mining of Genes Associated With Pubertal Initiation in Dolang Sheep
title Transcriptome Sequencing-Based Mining of Genes Associated With Pubertal Initiation in Dolang Sheep
title_full Transcriptome Sequencing-Based Mining of Genes Associated With Pubertal Initiation in Dolang Sheep
title_fullStr Transcriptome Sequencing-Based Mining of Genes Associated With Pubertal Initiation in Dolang Sheep
title_full_unstemmed Transcriptome Sequencing-Based Mining of Genes Associated With Pubertal Initiation in Dolang Sheep
title_short Transcriptome Sequencing-Based Mining of Genes Associated With Pubertal Initiation in Dolang Sheep
title_sort transcriptome sequencing-based mining of genes associated with pubertal initiation in dolang sheep
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928774/
https://www.ncbi.nlm.nih.gov/pubmed/35309120
http://dx.doi.org/10.3389/fgene.2022.818810
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