The complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii Brandt, 1858), from South Korea

In this study, we use a specimen from wild-caught individual to determine the complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii). The complete mitogenome of P. maackii has 16,258 bp in length and consists of 13 protein-coding genes (PCGs), 22 tRNAs, two rRNAs, and one...

Descripción completa

Detalles Bibliográficos
Autores principales: Baek, Hae-jun, Kim, Philjae, Kim, Young-Chae, Kim, Areum, Kim, Suhwan, Min, Mi-Sook, Lee, Hang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928817/
https://www.ncbi.nlm.nih.gov/pubmed/35311211
http://dx.doi.org/10.1080/23802359.2022.2051759
_version_ 1784670721772879872
author Baek, Hae-jun
Kim, Philjae
Kim, Young-Chae
Kim, Areum
Kim, Suhwan
Min, Mi-Sook
Lee, Hang
author_facet Baek, Hae-jun
Kim, Philjae
Kim, Young-Chae
Kim, Areum
Kim, Suhwan
Min, Mi-Sook
Lee, Hang
author_sort Baek, Hae-jun
collection PubMed
description In this study, we use a specimen from wild-caught individual to determine the complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii). The complete mitogenome of P. maackii has 16,258 bp in length and consists of 13 protein-coding genes (PCGs), 22 tRNAs, two rRNAs, and one control region. The arrangement of genes of P. maackii is identical with previously reported mitogenomes in the family Trionychoidea. According to our result, the ML tree for the phylogenetic reconstruction revealed that the individuals used in present study is closely related with the previously reported sequences of P. sinensis (AY962573 and MG431983) in p-distance 0.7% and 2.5%.
format Online
Article
Text
id pubmed-8928817
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-89288172022-03-18 The complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii Brandt, 1858), from South Korea Baek, Hae-jun Kim, Philjae Kim, Young-Chae Kim, Areum Kim, Suhwan Min, Mi-Sook Lee, Hang Mitochondrial DNA B Resour Mitogenome Announcement In this study, we use a specimen from wild-caught individual to determine the complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii). The complete mitogenome of P. maackii has 16,258 bp in length and consists of 13 protein-coding genes (PCGs), 22 tRNAs, two rRNAs, and one control region. The arrangement of genes of P. maackii is identical with previously reported mitogenomes in the family Trionychoidea. According to our result, the ML tree for the phylogenetic reconstruction revealed that the individuals used in present study is closely related with the previously reported sequences of P. sinensis (AY962573 and MG431983) in p-distance 0.7% and 2.5%. Taylor & Francis 2022-03-15 /pmc/articles/PMC8928817/ /pubmed/35311211 http://dx.doi.org/10.1080/23802359.2022.2051759 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Baek, Hae-jun
Kim, Philjae
Kim, Young-Chae
Kim, Areum
Kim, Suhwan
Min, Mi-Sook
Lee, Hang
The complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii Brandt, 1858), from South Korea
title The complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii Brandt, 1858), from South Korea
title_full The complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii Brandt, 1858), from South Korea
title_fullStr The complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii Brandt, 1858), from South Korea
title_full_unstemmed The complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii Brandt, 1858), from South Korea
title_short The complete mitochondrial genome of the Amur soft-shelled turtle (Pelodiscus maackii Brandt, 1858), from South Korea
title_sort complete mitochondrial genome of the amur soft-shelled turtle (pelodiscus maackii brandt, 1858), from south korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928817/
https://www.ncbi.nlm.nih.gov/pubmed/35311211
http://dx.doi.org/10.1080/23802359.2022.2051759
work_keys_str_mv AT baekhaejun thecompletemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT kimphiljae thecompletemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT kimyoungchae thecompletemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT kimareum thecompletemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT kimsuhwan thecompletemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT minmisook thecompletemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT leehang thecompletemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT baekhaejun completemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT kimphiljae completemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT kimyoungchae completemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT kimareum completemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT kimsuhwan completemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT minmisook completemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea
AT leehang completemitochondrialgenomeoftheamursoftshelledturtlepelodiscusmaackiibrandt1858fromsouthkorea

Ejemplares similares