The complete chloroplast genome of Chimonobambusa utilis (Keng) P. C. Keng, known as ‘the king of bamboo shoots’

The whole chloroplast (cp) genome sequence of Chimonobambusa utilis (Keng) P. C. Keng has been characterized using Illumina pair-end sequencing. The complete cp genome (GenBank accession: OK040769) was 139,540 bp in length, containing a large single copy region (LSC) of 83,133 bp and a small single...

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Autores principales: Xiao, Liangjun, Wu, Tao, Liao, Yongjian, Xu, Tian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928828/
https://www.ncbi.nlm.nih.gov/pubmed/35311203
http://dx.doi.org/10.1080/23802359.2022.2049986
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author Xiao, Liangjun
Wu, Tao
Liao, Yongjian
Xu, Tian
author_facet Xiao, Liangjun
Wu, Tao
Liao, Yongjian
Xu, Tian
author_sort Xiao, Liangjun
collection PubMed
description The whole chloroplast (cp) genome sequence of Chimonobambusa utilis (Keng) P. C. Keng has been characterized using Illumina pair-end sequencing. The complete cp genome (GenBank accession: OK040769) was 139,540 bp in length, containing a large single copy region (LSC) of 83,133 bp and a small single copy region (SSC) of 12,811 bp, which were separated by a pair of 21,798 bp inverted repeat regions (IRs). The genome contained 133 genes (114 unique), including 86 protein-coding genes (81 unique), 39 tRNA genes (29 unique), and eight rRNA genes (four unique). The overall GC content of C. utilis cp genome is 38.88%. Phylogenetic analysis of 32 cp genomes within the supertribe Bambusatae suggests that C. utilis is closely related to C. quadrangularis.
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spelling pubmed-89288282022-03-18 The complete chloroplast genome of Chimonobambusa utilis (Keng) P. C. Keng, known as ‘the king of bamboo shoots’ Xiao, Liangjun Wu, Tao Liao, Yongjian Xu, Tian Mitochondrial DNA B Resour Plastome Announcement The whole chloroplast (cp) genome sequence of Chimonobambusa utilis (Keng) P. C. Keng has been characterized using Illumina pair-end sequencing. The complete cp genome (GenBank accession: OK040769) was 139,540 bp in length, containing a large single copy region (LSC) of 83,133 bp and a small single copy region (SSC) of 12,811 bp, which were separated by a pair of 21,798 bp inverted repeat regions (IRs). The genome contained 133 genes (114 unique), including 86 protein-coding genes (81 unique), 39 tRNA genes (29 unique), and eight rRNA genes (four unique). The overall GC content of C. utilis cp genome is 38.88%. Phylogenetic analysis of 32 cp genomes within the supertribe Bambusatae suggests that C. utilis is closely related to C. quadrangularis. Taylor & Francis 2022-03-15 /pmc/articles/PMC8928828/ /pubmed/35311203 http://dx.doi.org/10.1080/23802359.2022.2049986 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Xiao, Liangjun
Wu, Tao
Liao, Yongjian
Xu, Tian
The complete chloroplast genome of Chimonobambusa utilis (Keng) P. C. Keng, known as ‘the king of bamboo shoots’
title The complete chloroplast genome of Chimonobambusa utilis (Keng) P. C. Keng, known as ‘the king of bamboo shoots’
title_full The complete chloroplast genome of Chimonobambusa utilis (Keng) P. C. Keng, known as ‘the king of bamboo shoots’
title_fullStr The complete chloroplast genome of Chimonobambusa utilis (Keng) P. C. Keng, known as ‘the king of bamboo shoots’
title_full_unstemmed The complete chloroplast genome of Chimonobambusa utilis (Keng) P. C. Keng, known as ‘the king of bamboo shoots’
title_short The complete chloroplast genome of Chimonobambusa utilis (Keng) P. C. Keng, known as ‘the king of bamboo shoots’
title_sort complete chloroplast genome of chimonobambusa utilis (keng) p. c. keng, known as ‘the king of bamboo shoots’
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928828/
https://www.ncbi.nlm.nih.gov/pubmed/35311203
http://dx.doi.org/10.1080/23802359.2022.2049986
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