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Criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish

To evaluate the bioaccumulation potential of chemicals in fish, a molecular-size descriptor, D(max aver), has been used as a weight of evidence under the EU REACH. The D(max aver) value, however, is estimated on the basis of 3-D structures of possible stable conformers in a vacuum using OASIS softwa...

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Autores principales: Miyata, Chiyoko, Matoba, Yoshihide, Mukumoto, Makiko, Nakagawa, Yoshiaki, Miyagawa, Hisashi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pesticide Science Society of Japan 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8931549/
https://www.ncbi.nlm.nih.gov/pubmed/35414761
http://dx.doi.org/10.1584/jpestics.D21-030
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author Miyata, Chiyoko
Matoba, Yoshihide
Mukumoto, Makiko
Nakagawa, Yoshiaki
Miyagawa, Hisashi
author_facet Miyata, Chiyoko
Matoba, Yoshihide
Mukumoto, Makiko
Nakagawa, Yoshiaki
Miyagawa, Hisashi
author_sort Miyata, Chiyoko
collection PubMed
description To evaluate the bioaccumulation potential of chemicals in fish, a molecular-size descriptor, D(max aver), has been used as a weight of evidence under the EU REACH. The D(max aver) value, however, is estimated on the basis of 3-D structures of possible stable conformers in a vacuum using OASIS software that requires expertise upon parameter input. We developed a method to calculate the 3-D conformers in water, which is more suitable for bioaccumulation potential evaluation in an aquatic environment, by introducing MD simulation. By examining the relationship of the calculated molecular size of 1665 chemicals with their reported BCF values, we found that 17.1 Å of D(max aver) or 15.6 Å of D(max min) was a threshold of molecular size in water to predict the low bioaccumulation (i.e., BCF<5000) of a chemical. Setting this threshold as a new standard would reduce the number of animal tests without compromising the quality of safety evaluation.
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spelling pubmed-89315492022-04-11 Criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish Miyata, Chiyoko Matoba, Yoshihide Mukumoto, Makiko Nakagawa, Yoshiaki Miyagawa, Hisashi J Pestic Sci Regular Article To evaluate the bioaccumulation potential of chemicals in fish, a molecular-size descriptor, D(max aver), has been used as a weight of evidence under the EU REACH. The D(max aver) value, however, is estimated on the basis of 3-D structures of possible stable conformers in a vacuum using OASIS software that requires expertise upon parameter input. We developed a method to calculate the 3-D conformers in water, which is more suitable for bioaccumulation potential evaluation in an aquatic environment, by introducing MD simulation. By examining the relationship of the calculated molecular size of 1665 chemicals with their reported BCF values, we found that 17.1 Å of D(max aver) or 15.6 Å of D(max min) was a threshold of molecular size in water to predict the low bioaccumulation (i.e., BCF<5000) of a chemical. Setting this threshold as a new standard would reduce the number of animal tests without compromising the quality of safety evaluation. Pesticide Science Society of Japan 2022-02-20 /pmc/articles/PMC8931549/ /pubmed/35414761 http://dx.doi.org/10.1584/jpestics.D21-030 Text en © 2022 Pesticide Science Society of Japan https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) License.
spellingShingle Regular Article
Miyata, Chiyoko
Matoba, Yoshihide
Mukumoto, Makiko
Nakagawa, Yoshiaki
Miyagawa, Hisashi
Criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish
title Criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish
title_full Criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish
title_fullStr Criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish
title_full_unstemmed Criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish
title_short Criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish
title_sort criterion of molecular size to evaluate the bioaccumulation potential of chemicals in fish
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8931549/
https://www.ncbi.nlm.nih.gov/pubmed/35414761
http://dx.doi.org/10.1584/jpestics.D21-030
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