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Self-phoretic Brownian dynamics simulations
ABSTRACT: A realistic and effective model to simulate phoretic Brownian dynamics swimmers based on the general form of the thermophoretic force is here presented. The collective behavior of self-phoretic dimers is investigated with this model and compared with two simpler versions, allowing the unde...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933386/ https://www.ncbi.nlm.nih.gov/pubmed/35303182 http://dx.doi.org/10.1140/epje/s10189-022-00177-3 |
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author | Roca-Bonet, Sergi Ripoll, Marisol |
author_facet | Roca-Bonet, Sergi Ripoll, Marisol |
author_sort | Roca-Bonet, Sergi |
collection | PubMed |
description | ABSTRACT: A realistic and effective model to simulate phoretic Brownian dynamics swimmers based on the general form of the thermophoretic force is here presented. The collective behavior of self-phoretic dimers is investigated with this model and compared with two simpler versions, allowing the understanding of the subtle interplay of steric interactions, propulsion, and phoretic effects. The phoretic Brownian dynamics method has control parameters which can be tuned to closely map the properties of experiments or simulations with explicit solvent, in particular those performed with multiparticle collision dynamics. The combination of the phoretic Brownian method and multiparticle collision dynamics is a powerful tool to precisely identify the importance of hydrodynamic interactions in systems of self-phoretic swimmers. GRAPHIC ABSTRACT: [Image: see text] |
format | Online Article Text |
id | pubmed-8933386 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-89333862022-04-01 Self-phoretic Brownian dynamics simulations Roca-Bonet, Sergi Ripoll, Marisol Eur Phys J E Soft Matter Regular Article - Flowing Matter ABSTRACT: A realistic and effective model to simulate phoretic Brownian dynamics swimmers based on the general form of the thermophoretic force is here presented. The collective behavior of self-phoretic dimers is investigated with this model and compared with two simpler versions, allowing the understanding of the subtle interplay of steric interactions, propulsion, and phoretic effects. The phoretic Brownian dynamics method has control parameters which can be tuned to closely map the properties of experiments or simulations with explicit solvent, in particular those performed with multiparticle collision dynamics. The combination of the phoretic Brownian method and multiparticle collision dynamics is a powerful tool to precisely identify the importance of hydrodynamic interactions in systems of self-phoretic swimmers. GRAPHIC ABSTRACT: [Image: see text] Springer Berlin Heidelberg 2022-03-18 2022 /pmc/articles/PMC8933386/ /pubmed/35303182 http://dx.doi.org/10.1140/epje/s10189-022-00177-3 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Regular Article - Flowing Matter Roca-Bonet, Sergi Ripoll, Marisol Self-phoretic Brownian dynamics simulations |
title | Self-phoretic Brownian dynamics simulations |
title_full | Self-phoretic Brownian dynamics simulations |
title_fullStr | Self-phoretic Brownian dynamics simulations |
title_full_unstemmed | Self-phoretic Brownian dynamics simulations |
title_short | Self-phoretic Brownian dynamics simulations |
title_sort | self-phoretic brownian dynamics simulations |
topic | Regular Article - Flowing Matter |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933386/ https://www.ncbi.nlm.nih.gov/pubmed/35303182 http://dx.doi.org/10.1140/epje/s10189-022-00177-3 |
work_keys_str_mv | AT rocabonetsergi selfphoreticbrowniandynamicssimulations AT ripollmarisol selfphoreticbrowniandynamicssimulations |