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Assessing radiomics feature stability with simulated CT acquisitions

Medical imaging quantitative features had once disputable usefulness in clinical studies. Nowadays, advancements in analysis techniques, for instance through machine learning, have enabled quantitative features to be progressively useful in diagnosis and research. Tissue characterisation is improved...

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Autores principales: Flouris, Kyriakos, Jimenez-del-Toro, Oscar, Aberle, Christoph, Bach, Michael, Schaer, Roger, Obmann, Markus M., Stieltjes, Bram, Müller, Henning, Depeursinge, Adrien, Konukoglu, Ender
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933485/
https://www.ncbi.nlm.nih.gov/pubmed/35304508
http://dx.doi.org/10.1038/s41598-022-08301-1
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author Flouris, Kyriakos
Jimenez-del-Toro, Oscar
Aberle, Christoph
Bach, Michael
Schaer, Roger
Obmann, Markus M.
Stieltjes, Bram
Müller, Henning
Depeursinge, Adrien
Konukoglu, Ender
author_facet Flouris, Kyriakos
Jimenez-del-Toro, Oscar
Aberle, Christoph
Bach, Michael
Schaer, Roger
Obmann, Markus M.
Stieltjes, Bram
Müller, Henning
Depeursinge, Adrien
Konukoglu, Ender
author_sort Flouris, Kyriakos
collection PubMed
description Medical imaging quantitative features had once disputable usefulness in clinical studies. Nowadays, advancements in analysis techniques, for instance through machine learning, have enabled quantitative features to be progressively useful in diagnosis and research. Tissue characterisation is improved via the “radiomics” features, whose extraction can be automated. Despite the advances, stability of quantitative features remains an important open problem. As features can be highly sensitive to variations of acquisition details, it is not trivial to quantify stability and efficiently select stable features. In this work, we develop and validate a Computed Tomography (CT) simulator environment based on the publicly available ASTRA toolbox (www.astra-toolbox.com). We show that the variability, stability and discriminative power of the radiomics features extracted from the virtual phantom images generated by the simulator are similar to those observed in a tandem phantom study. Additionally, we show that the variability is matched between a multi-center phantom study and simulated results. Consequently, we demonstrate that the simulator can be utilised to assess radiomics features’ stability and discriminative power.
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spelling pubmed-89334852022-03-28 Assessing radiomics feature stability with simulated CT acquisitions Flouris, Kyriakos Jimenez-del-Toro, Oscar Aberle, Christoph Bach, Michael Schaer, Roger Obmann, Markus M. Stieltjes, Bram Müller, Henning Depeursinge, Adrien Konukoglu, Ender Sci Rep Article Medical imaging quantitative features had once disputable usefulness in clinical studies. Nowadays, advancements in analysis techniques, for instance through machine learning, have enabled quantitative features to be progressively useful in diagnosis and research. Tissue characterisation is improved via the “radiomics” features, whose extraction can be automated. Despite the advances, stability of quantitative features remains an important open problem. As features can be highly sensitive to variations of acquisition details, it is not trivial to quantify stability and efficiently select stable features. In this work, we develop and validate a Computed Tomography (CT) simulator environment based on the publicly available ASTRA toolbox (www.astra-toolbox.com). We show that the variability, stability and discriminative power of the radiomics features extracted from the virtual phantom images generated by the simulator are similar to those observed in a tandem phantom study. Additionally, we show that the variability is matched between a multi-center phantom study and simulated results. Consequently, we demonstrate that the simulator can be utilised to assess radiomics features’ stability and discriminative power. Nature Publishing Group UK 2022-03-18 /pmc/articles/PMC8933485/ /pubmed/35304508 http://dx.doi.org/10.1038/s41598-022-08301-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Flouris, Kyriakos
Jimenez-del-Toro, Oscar
Aberle, Christoph
Bach, Michael
Schaer, Roger
Obmann, Markus M.
Stieltjes, Bram
Müller, Henning
Depeursinge, Adrien
Konukoglu, Ender
Assessing radiomics feature stability with simulated CT acquisitions
title Assessing radiomics feature stability with simulated CT acquisitions
title_full Assessing radiomics feature stability with simulated CT acquisitions
title_fullStr Assessing radiomics feature stability with simulated CT acquisitions
title_full_unstemmed Assessing radiomics feature stability with simulated CT acquisitions
title_short Assessing radiomics feature stability with simulated CT acquisitions
title_sort assessing radiomics feature stability with simulated ct acquisitions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933485/
https://www.ncbi.nlm.nih.gov/pubmed/35304508
http://dx.doi.org/10.1038/s41598-022-08301-1
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