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The data on molecular docking of cinnamic acid amide on dengue viral target NS2B/NS3
A natural occurring class compound, cinnamic acid is composed of a benzene ring, an alkene double bond and an acrylic acid functional group. Due to the feasibility of its structure modifications with a variety of compounds, cinnamic acids have been actively explored to improve their biological effic...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933529/ https://www.ncbi.nlm.nih.gov/pubmed/35313492 http://dx.doi.org/10.1016/j.dib.2022.108036 |
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author | Yusoff, Nadia Mohamed Asari, Asnuzilawati Addis, Siti Nor Khadijah |
author_facet | Yusoff, Nadia Mohamed Asari, Asnuzilawati Addis, Siti Nor Khadijah |
author_sort | Yusoff, Nadia Mohamed |
collection | PubMed |
description | A natural occurring class compound, cinnamic acid is composed of a benzene ring, an alkene double bond and an acrylic acid functional group. Due to the feasibility of its structure modifications with a variety of compounds, cinnamic acids have been actively explored to improve their biological efficacy. Cinnamic acid derivatives have been reported to exhibit an antimicrobial property. Despite the beneficial properties of cinnamic acid derivatives, the antiviral activity of the amide derivatives especially against the dengue virus is poorly defined. Herein, the cinnamic amide derivatives were evaluated for their potential as an anti-dengue virus through the in-silico analysis of the derivatives. This data aimed to analyze the interactions of the derivatives against the non-structural protein of viral target, dengue virus type 2 (DENV-2) NS2B/N3. The evaluation was based on binding affinity, interaction type (bond type and distance) and interaction with amino acids. Three derivatives (CAA15, CAA16 and CAA17) with the best docking score were reported. Enhanced understanding of the interaction acquired from this analysis provide a useful information on for the prediction of the binding behavior affinity of cinnamic amide derivatives and is ultimately useful in the rational design of drugs to synthesis new compounds with the potential benefits against DENV-2. |
format | Online Article Text |
id | pubmed-8933529 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-89335292022-03-20 The data on molecular docking of cinnamic acid amide on dengue viral target NS2B/NS3 Yusoff, Nadia Mohamed Asari, Asnuzilawati Addis, Siti Nor Khadijah Data Brief Data Article A natural occurring class compound, cinnamic acid is composed of a benzene ring, an alkene double bond and an acrylic acid functional group. Due to the feasibility of its structure modifications with a variety of compounds, cinnamic acids have been actively explored to improve their biological efficacy. Cinnamic acid derivatives have been reported to exhibit an antimicrobial property. Despite the beneficial properties of cinnamic acid derivatives, the antiviral activity of the amide derivatives especially against the dengue virus is poorly defined. Herein, the cinnamic amide derivatives were evaluated for their potential as an anti-dengue virus through the in-silico analysis of the derivatives. This data aimed to analyze the interactions of the derivatives against the non-structural protein of viral target, dengue virus type 2 (DENV-2) NS2B/N3. The evaluation was based on binding affinity, interaction type (bond type and distance) and interaction with amino acids. Three derivatives (CAA15, CAA16 and CAA17) with the best docking score were reported. Enhanced understanding of the interaction acquired from this analysis provide a useful information on for the prediction of the binding behavior affinity of cinnamic amide derivatives and is ultimately useful in the rational design of drugs to synthesis new compounds with the potential benefits against DENV-2. Elsevier 2022-03-08 /pmc/articles/PMC8933529/ /pubmed/35313492 http://dx.doi.org/10.1016/j.dib.2022.108036 Text en © 2022 The Author(s). Published by Elsevier Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Yusoff, Nadia Mohamed Asari, Asnuzilawati Addis, Siti Nor Khadijah The data on molecular docking of cinnamic acid amide on dengue viral target NS2B/NS3 |
title | The data on molecular docking of cinnamic acid amide on dengue viral target NS2B/NS3 |
title_full | The data on molecular docking of cinnamic acid amide on dengue viral target NS2B/NS3 |
title_fullStr | The data on molecular docking of cinnamic acid amide on dengue viral target NS2B/NS3 |
title_full_unstemmed | The data on molecular docking of cinnamic acid amide on dengue viral target NS2B/NS3 |
title_short | The data on molecular docking of cinnamic acid amide on dengue viral target NS2B/NS3 |
title_sort | data on molecular docking of cinnamic acid amide on dengue viral target ns2b/ns3 |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933529/ https://www.ncbi.nlm.nih.gov/pubmed/35313492 http://dx.doi.org/10.1016/j.dib.2022.108036 |
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