Cargando…

A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis

Among morphological phenomena, cellular patterns in developing sensory epithelia have gained attention in recent years. Although physical models for cellular rearrangements are well-established thanks to a large bulk of experimental work, their computational implementation lacks solid mathematical b...

Descripción completa

Detalles Bibliográficos
Autores principales: Mohammad, Rhudaina Z., Murakawa, Hideki, Svadlenka, Karel, Togashi, Hideru
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933555/
https://www.ncbi.nlm.nih.gov/pubmed/35304570
http://dx.doi.org/10.1038/s42003-022-03174-6
_version_ 1784671681689681920
author Mohammad, Rhudaina Z.
Murakawa, Hideki
Svadlenka, Karel
Togashi, Hideru
author_facet Mohammad, Rhudaina Z.
Murakawa, Hideki
Svadlenka, Karel
Togashi, Hideru
author_sort Mohammad, Rhudaina Z.
collection PubMed
description Among morphological phenomena, cellular patterns in developing sensory epithelia have gained attention in recent years. Although physical models for cellular rearrangements are well-established thanks to a large bulk of experimental work, their computational implementation lacks solid mathematical background and involves experimentally unreachable parameters. Here we introduce a level set-based computational framework as a tool to rigorously investigate evolving cellular patterns, and study its mathematical and computational properties. We illustrate that a compelling feature of the method is its ability to correctly handle complex topology changes, including frequent cell intercalations. Combining this accurate numerical scheme with an established mathematical model, we show that the proposed framework features minimum possible number of parameters and is capable of reproducing a wide range of tissue morphological phenomena, such as cell sorting, engulfment or internalization. In particular, thanks to precise mathematical treatment of cellular intercalations, this method succeeds in simulating experimentally observed development of cellular mosaic patterns in sensory epithelia.
format Online
Article
Text
id pubmed-8933555
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-89335552022-04-01 A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis Mohammad, Rhudaina Z. Murakawa, Hideki Svadlenka, Karel Togashi, Hideru Commun Biol Article Among morphological phenomena, cellular patterns in developing sensory epithelia have gained attention in recent years. Although physical models for cellular rearrangements are well-established thanks to a large bulk of experimental work, their computational implementation lacks solid mathematical background and involves experimentally unreachable parameters. Here we introduce a level set-based computational framework as a tool to rigorously investigate evolving cellular patterns, and study its mathematical and computational properties. We illustrate that a compelling feature of the method is its ability to correctly handle complex topology changes, including frequent cell intercalations. Combining this accurate numerical scheme with an established mathematical model, we show that the proposed framework features minimum possible number of parameters and is capable of reproducing a wide range of tissue morphological phenomena, such as cell sorting, engulfment or internalization. In particular, thanks to precise mathematical treatment of cellular intercalations, this method succeeds in simulating experimentally observed development of cellular mosaic patterns in sensory epithelia. Nature Publishing Group UK 2022-03-18 /pmc/articles/PMC8933555/ /pubmed/35304570 http://dx.doi.org/10.1038/s42003-022-03174-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Mohammad, Rhudaina Z.
Murakawa, Hideki
Svadlenka, Karel
Togashi, Hideru
A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis
title A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis
title_full A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis
title_fullStr A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis
title_full_unstemmed A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis
title_short A numerical algorithm for modeling cellular rearrangements in tissue morphogenesis
title_sort numerical algorithm for modeling cellular rearrangements in tissue morphogenesis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933555/
https://www.ncbi.nlm.nih.gov/pubmed/35304570
http://dx.doi.org/10.1038/s42003-022-03174-6
work_keys_str_mv AT mohammadrhudainaz anumericalalgorithmformodelingcellularrearrangementsintissuemorphogenesis
AT murakawahideki anumericalalgorithmformodelingcellularrearrangementsintissuemorphogenesis
AT svadlenkakarel anumericalalgorithmformodelingcellularrearrangementsintissuemorphogenesis
AT togashihideru anumericalalgorithmformodelingcellularrearrangementsintissuemorphogenesis
AT mohammadrhudainaz numericalalgorithmformodelingcellularrearrangementsintissuemorphogenesis
AT murakawahideki numericalalgorithmformodelingcellularrearrangementsintissuemorphogenesis
AT svadlenkakarel numericalalgorithmformodelingcellularrearrangementsintissuemorphogenesis
AT togashihideru numericalalgorithmformodelingcellularrearrangementsintissuemorphogenesis