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Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images
COVID-19 cases are putting pressure on healthcare systems all around the world. Due to the lack of available testing kits, it is impractical for screening every patient with a respiratory ailment using traditional methods (RT-PCR). In addition, the tests have a high turn-around time and low sensitiv...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Authors. Published by Elsevier Ltd.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933872/ https://www.ncbi.nlm.nih.gov/pubmed/35342787 http://dx.doi.org/10.1016/j.imu.2022.100916 |
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author | Hossain, Md. Belal Iqbal, S.M. Hasan Sazzad Islam, Md. Monirul Akhtar, Md. Nasim Sarker, Iqbal H. |
author_facet | Hossain, Md. Belal Iqbal, S.M. Hasan Sazzad Islam, Md. Monirul Akhtar, Md. Nasim Sarker, Iqbal H. |
author_sort | Hossain, Md. Belal |
collection | PubMed |
description | COVID-19 cases are putting pressure on healthcare systems all around the world. Due to the lack of available testing kits, it is impractical for screening every patient with a respiratory ailment using traditional methods (RT-PCR). In addition, the tests have a high turn-around time and low sensitivity. Detecting suspected COVID-19 infections from the chest X-ray might help isolate high-risk people before the RT-PCR test. Most healthcare systems already have X-ray equipment, and because most current X-ray systems have already been computerized, there is no need to transfer the samples. The use of a chest X-ray to prioritize the selection of patients for subsequent RT-PCR testing is the motivation of this work. Transfer learning (TL) with fine-tuning on deep convolutional neural network-based ResNet50 model has been proposed in this work to classify COVID-19 patients from the COVID-19 Radiography Database. Ten distinct pre-trained weights, trained on varieties of large-scale datasets using various approaches such as supervised learning, self-supervised learning, and others, have been utilized in this work. Our proposed [Formula: see text] model, pre-trained on the iNat2021 Mini dataset using the SwAV algorithm, outperforms the other ResNet50 TL models. For COVID instances in the two-class (Covid and Normal) classification, our work achieved 99.17% validation accuracy, 99.95% train accuracy, 99.31% precision, 99.03% sensitivity, and 99.17% F1-score. Some domain-adapted ([Formula: see text]) and in-domain (ChexPert, ChestX-ray14) models looked promising in medical image classification by scoring significantly higher than other models. |
format | Online Article Text |
id | pubmed-8933872 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Authors. Published by Elsevier Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89338722022-03-21 Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images Hossain, Md. Belal Iqbal, S.M. Hasan Sazzad Islam, Md. Monirul Akhtar, Md. Nasim Sarker, Iqbal H. Inform Med Unlocked Article COVID-19 cases are putting pressure on healthcare systems all around the world. Due to the lack of available testing kits, it is impractical for screening every patient with a respiratory ailment using traditional methods (RT-PCR). In addition, the tests have a high turn-around time and low sensitivity. Detecting suspected COVID-19 infections from the chest X-ray might help isolate high-risk people before the RT-PCR test. Most healthcare systems already have X-ray equipment, and because most current X-ray systems have already been computerized, there is no need to transfer the samples. The use of a chest X-ray to prioritize the selection of patients for subsequent RT-PCR testing is the motivation of this work. Transfer learning (TL) with fine-tuning on deep convolutional neural network-based ResNet50 model has been proposed in this work to classify COVID-19 patients from the COVID-19 Radiography Database. Ten distinct pre-trained weights, trained on varieties of large-scale datasets using various approaches such as supervised learning, self-supervised learning, and others, have been utilized in this work. Our proposed [Formula: see text] model, pre-trained on the iNat2021 Mini dataset using the SwAV algorithm, outperforms the other ResNet50 TL models. For COVID instances in the two-class (Covid and Normal) classification, our work achieved 99.17% validation accuracy, 99.95% train accuracy, 99.31% precision, 99.03% sensitivity, and 99.17% F1-score. Some domain-adapted ([Formula: see text]) and in-domain (ChexPert, ChestX-ray14) models looked promising in medical image classification by scoring significantly higher than other models. The Authors. Published by Elsevier Ltd. 2022 2022-03-19 /pmc/articles/PMC8933872/ /pubmed/35342787 http://dx.doi.org/10.1016/j.imu.2022.100916 Text en © 2022 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Article Hossain, Md. Belal Iqbal, S.M. Hasan Sazzad Islam, Md. Monirul Akhtar, Md. Nasim Sarker, Iqbal H. Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images |
title | Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images |
title_full | Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images |
title_fullStr | Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images |
title_full_unstemmed | Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images |
title_short | Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images |
title_sort | transfer learning with fine-tuned deep cnn resnet50 model for classifying covid-19 from chest x-ray images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933872/ https://www.ncbi.nlm.nih.gov/pubmed/35342787 http://dx.doi.org/10.1016/j.imu.2022.100916 |
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