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Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images

COVID-19 cases are putting pressure on healthcare systems all around the world. Due to the lack of available testing kits, it is impractical for screening every patient with a respiratory ailment using traditional methods (RT-PCR). In addition, the tests have a high turn-around time and low sensitiv...

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Autores principales: Hossain, Md. Belal, Iqbal, S.M. Hasan Sazzad, Islam, Md. Monirul, Akhtar, Md. Nasim, Sarker, Iqbal H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933872/
https://www.ncbi.nlm.nih.gov/pubmed/35342787
http://dx.doi.org/10.1016/j.imu.2022.100916
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author Hossain, Md. Belal
Iqbal, S.M. Hasan Sazzad
Islam, Md. Monirul
Akhtar, Md. Nasim
Sarker, Iqbal H.
author_facet Hossain, Md. Belal
Iqbal, S.M. Hasan Sazzad
Islam, Md. Monirul
Akhtar, Md. Nasim
Sarker, Iqbal H.
author_sort Hossain, Md. Belal
collection PubMed
description COVID-19 cases are putting pressure on healthcare systems all around the world. Due to the lack of available testing kits, it is impractical for screening every patient with a respiratory ailment using traditional methods (RT-PCR). In addition, the tests have a high turn-around time and low sensitivity. Detecting suspected COVID-19 infections from the chest X-ray might help isolate high-risk people before the RT-PCR test. Most healthcare systems already have X-ray equipment, and because most current X-ray systems have already been computerized, there is no need to transfer the samples. The use of a chest X-ray to prioritize the selection of patients for subsequent RT-PCR testing is the motivation of this work. Transfer learning (TL) with fine-tuning on deep convolutional neural network-based ResNet50 model has been proposed in this work to classify COVID-19 patients from the COVID-19 Radiography Database. Ten distinct pre-trained weights, trained on varieties of large-scale datasets using various approaches such as supervised learning, self-supervised learning, and others, have been utilized in this work. Our proposed [Formula: see text] model, pre-trained on the iNat2021 Mini dataset using the SwAV algorithm, outperforms the other ResNet50 TL models. For COVID instances in the two-class (Covid and Normal) classification, our work achieved 99.17% validation accuracy, 99.95% train accuracy, 99.31% precision, 99.03% sensitivity, and 99.17% F1-score. Some domain-adapted ([Formula: see text]) and in-domain (ChexPert, ChestX-ray14) models looked promising in medical image classification by scoring significantly higher than other models.
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spelling pubmed-89338722022-03-21 Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images Hossain, Md. Belal Iqbal, S.M. Hasan Sazzad Islam, Md. Monirul Akhtar, Md. Nasim Sarker, Iqbal H. Inform Med Unlocked Article COVID-19 cases are putting pressure on healthcare systems all around the world. Due to the lack of available testing kits, it is impractical for screening every patient with a respiratory ailment using traditional methods (RT-PCR). In addition, the tests have a high turn-around time and low sensitivity. Detecting suspected COVID-19 infections from the chest X-ray might help isolate high-risk people before the RT-PCR test. Most healthcare systems already have X-ray equipment, and because most current X-ray systems have already been computerized, there is no need to transfer the samples. The use of a chest X-ray to prioritize the selection of patients for subsequent RT-PCR testing is the motivation of this work. Transfer learning (TL) with fine-tuning on deep convolutional neural network-based ResNet50 model has been proposed in this work to classify COVID-19 patients from the COVID-19 Radiography Database. Ten distinct pre-trained weights, trained on varieties of large-scale datasets using various approaches such as supervised learning, self-supervised learning, and others, have been utilized in this work. Our proposed [Formula: see text] model, pre-trained on the iNat2021 Mini dataset using the SwAV algorithm, outperforms the other ResNet50 TL models. For COVID instances in the two-class (Covid and Normal) classification, our work achieved 99.17% validation accuracy, 99.95% train accuracy, 99.31% precision, 99.03% sensitivity, and 99.17% F1-score. Some domain-adapted ([Formula: see text]) and in-domain (ChexPert, ChestX-ray14) models looked promising in medical image classification by scoring significantly higher than other models. The Authors. Published by Elsevier Ltd. 2022 2022-03-19 /pmc/articles/PMC8933872/ /pubmed/35342787 http://dx.doi.org/10.1016/j.imu.2022.100916 Text en © 2022 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Hossain, Md. Belal
Iqbal, S.M. Hasan Sazzad
Islam, Md. Monirul
Akhtar, Md. Nasim
Sarker, Iqbal H.
Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images
title Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images
title_full Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images
title_fullStr Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images
title_full_unstemmed Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images
title_short Transfer learning with fine-tuned deep CNN ResNet50 model for classifying COVID-19 from chest X-ray images
title_sort transfer learning with fine-tuned deep cnn resnet50 model for classifying covid-19 from chest x-ray images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8933872/
https://www.ncbi.nlm.nih.gov/pubmed/35342787
http://dx.doi.org/10.1016/j.imu.2022.100916
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