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Detection performance of PCR for Legionella pneumophila in environmental samples: a systematic review and meta-analysis

BACKGROUND: Legionellosis remains a public health problem. The most common diagnostic method to detect Legionella pneumophila (L. pneumophila) is culture. Polymerase chain reaction (PCR) is a fast and accurate method for this detection in environmental samples. METHODS: Four databases were searched...

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Autores principales: Yin, Xin, Chen, Ying-Zhou, Ye, Qi-Qing, Liao, Li-Juan, Cai, Zhuo-Rui, Lin, Min, Li, Jia-Na, Zhang, Geng-Biao, Peng, Xiao-Li, Shi, Wen-Fang, Guo, Xu-Guang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8934000/
https://www.ncbi.nlm.nih.gov/pubmed/35303873
http://dx.doi.org/10.1186/s12941-022-00503-9
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author Yin, Xin
Chen, Ying-Zhou
Ye, Qi-Qing
Liao, Li-Juan
Cai, Zhuo-Rui
Lin, Min
Li, Jia-Na
Zhang, Geng-Biao
Peng, Xiao-Li
Shi, Wen-Fang
Guo, Xu-Guang
author_facet Yin, Xin
Chen, Ying-Zhou
Ye, Qi-Qing
Liao, Li-Juan
Cai, Zhuo-Rui
Lin, Min
Li, Jia-Na
Zhang, Geng-Biao
Peng, Xiao-Li
Shi, Wen-Fang
Guo, Xu-Guang
author_sort Yin, Xin
collection PubMed
description BACKGROUND: Legionellosis remains a public health problem. The most common diagnostic method to detect Legionella pneumophila (L. pneumophila) is culture. Polymerase chain reaction (PCR) is a fast and accurate method for this detection in environmental samples. METHODS: Four databases were searched for studies that evaluated the detection efficiency of PCR in L. pneumophila. The quality evaluation was conducted using Review Manager 5.3. We used Meta-DiSc 1.4 software and the Stata 15.0 software to create forest plots, a meta-regression, a bivariate boxplot and a Deeks’ funnel plot. RESULTS: A total of 18 four-fold tables from 16 studies were analysed. The overall pooled sensitivity and specificity of PCR was 94% and 72%, respectively. The positive likelihood ratio (RLR) and negative likelihood ratio (NLR) was 2.73 and 0.12, respectively. The result of the diagnostic odds ratio (DOR) was 22.85 and the area under the curve (AUC) was 0.7884. CONCLUSION: Establishing a laboratory diagnostic tool for L. pneumophila detection is important for epidemiological studies. In this work, PCR demonstrated a promising diagnostic accuracy for L. pneumophila. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12941-022-00503-9.
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spelling pubmed-89340002022-03-23 Detection performance of PCR for Legionella pneumophila in environmental samples: a systematic review and meta-analysis Yin, Xin Chen, Ying-Zhou Ye, Qi-Qing Liao, Li-Juan Cai, Zhuo-Rui Lin, Min Li, Jia-Na Zhang, Geng-Biao Peng, Xiao-Li Shi, Wen-Fang Guo, Xu-Guang Ann Clin Microbiol Antimicrob Review BACKGROUND: Legionellosis remains a public health problem. The most common diagnostic method to detect Legionella pneumophila (L. pneumophila) is culture. Polymerase chain reaction (PCR) is a fast and accurate method for this detection in environmental samples. METHODS: Four databases were searched for studies that evaluated the detection efficiency of PCR in L. pneumophila. The quality evaluation was conducted using Review Manager 5.3. We used Meta-DiSc 1.4 software and the Stata 15.0 software to create forest plots, a meta-regression, a bivariate boxplot and a Deeks’ funnel plot. RESULTS: A total of 18 four-fold tables from 16 studies were analysed. The overall pooled sensitivity and specificity of PCR was 94% and 72%, respectively. The positive likelihood ratio (RLR) and negative likelihood ratio (NLR) was 2.73 and 0.12, respectively. The result of the diagnostic odds ratio (DOR) was 22.85 and the area under the curve (AUC) was 0.7884. CONCLUSION: Establishing a laboratory diagnostic tool for L. pneumophila detection is important for epidemiological studies. In this work, PCR demonstrated a promising diagnostic accuracy for L. pneumophila. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12941-022-00503-9. BioMed Central 2022-03-18 /pmc/articles/PMC8934000/ /pubmed/35303873 http://dx.doi.org/10.1186/s12941-022-00503-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Review
Yin, Xin
Chen, Ying-Zhou
Ye, Qi-Qing
Liao, Li-Juan
Cai, Zhuo-Rui
Lin, Min
Li, Jia-Na
Zhang, Geng-Biao
Peng, Xiao-Li
Shi, Wen-Fang
Guo, Xu-Guang
Detection performance of PCR for Legionella pneumophila in environmental samples: a systematic review and meta-analysis
title Detection performance of PCR for Legionella pneumophila in environmental samples: a systematic review and meta-analysis
title_full Detection performance of PCR for Legionella pneumophila in environmental samples: a systematic review and meta-analysis
title_fullStr Detection performance of PCR for Legionella pneumophila in environmental samples: a systematic review and meta-analysis
title_full_unstemmed Detection performance of PCR for Legionella pneumophila in environmental samples: a systematic review and meta-analysis
title_short Detection performance of PCR for Legionella pneumophila in environmental samples: a systematic review and meta-analysis
title_sort detection performance of pcr for legionella pneumophila in environmental samples: a systematic review and meta-analysis
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8934000/
https://www.ncbi.nlm.nih.gov/pubmed/35303873
http://dx.doi.org/10.1186/s12941-022-00503-9
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