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3GOLD: optimized Levenshtein distance for clustering third-generation sequencing data
BACKGROUND: Third-generation sequencing offers some advantages over next-generation sequencing predecessors, but with the caveat of harboring a much higher error rate. Clustering-related sequences is an essential task in modern biology. To accurately cluster sequences rich in errors, error type and...
Autores principales: | Logan, Robert, Fleischmann, Zoe, Annis, Sofia, Wehe, Amy Wangsness, Tilly, Jonathan L., Woods, Dori C., Khrapko, Konstantin |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8934446/ https://www.ncbi.nlm.nih.gov/pubmed/35307007 http://dx.doi.org/10.1186/s12859-022-04637-7 |
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