Cargando…
Evaluating the association between MPDZ-NF1B rs1324183 and keratoconus in an independent northwestern Chinese population
BACKGROUND: Keratoconus (KC) is a complex, non-inflammatory corneal degenerative disease. Although numerous studies have analyzed the correlation of SNP rs1324183, which located in MPDZ-NF1B gene, and KC in different populations, only few findings were repeated. In this study, to evaluate the associ...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8934471/ https://www.ncbi.nlm.nih.gov/pubmed/35305607 http://dx.doi.org/10.1186/s12886-022-02359-1 |
_version_ | 1784671856255565824 |
---|---|
author | Yuan, Shiqin Li, Dong Ma, Meijiao Zhou, Lingjie Ma, Zhen Shi, Baoyu Zhang, Shuang Li, Huiping Sheng, Xunlun Liu, Junxiu |
author_facet | Yuan, Shiqin Li, Dong Ma, Meijiao Zhou, Lingjie Ma, Zhen Shi, Baoyu Zhang, Shuang Li, Huiping Sheng, Xunlun Liu, Junxiu |
author_sort | Yuan, Shiqin |
collection | PubMed |
description | BACKGROUND: Keratoconus (KC) is a complex, non-inflammatory corneal degenerative disease. Although numerous studies have analyzed the correlation of SNP rs1324183, which located in MPDZ-NF1B gene, and KC in different populations, only few findings were repeated. In this study, to evaluate the association between rs1324183 and KC in a new independent Chinese population, we performed a replication study of the significantly associated rs1324183. METHODS: In total of 114 unrelated KC patients and 88 unrelated controls were recruited from Ningxia, China. We detected the genotypes and alleles of rs1324183 using PCR technology and Sanger sequencing and also analyzed the association between this locus and KC, its clinical parameters by statistical methods. RESULTS: The frequency of genotype AA (11, 9.6%) and genotypes containing allele A (47, 41.2%) of rs1324183 in KC were both higher than those of the control group. And genotype AA of rs1324183 conferred a higher risk of KC (OR > 1). Moreover, corneal parameter Belin/Ambrósio enhanced ectasia display final D value (BAD-D) had significant correlation (p = 0.002) with AA genotype of rs1324183 in KC. CONCLUSIONS: Our replication study indicates that the results of rs1324183 associated with KC in our population is robust and further better illustrates the significance of BAD-D as a diagnostic indicator for KC. rs1324183 should be considered as the first genetic mark of KC risk in its future diagnosis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12886-022-02359-1. |
format | Online Article Text |
id | pubmed-8934471 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-89344712022-03-23 Evaluating the association between MPDZ-NF1B rs1324183 and keratoconus in an independent northwestern Chinese population Yuan, Shiqin Li, Dong Ma, Meijiao Zhou, Lingjie Ma, Zhen Shi, Baoyu Zhang, Shuang Li, Huiping Sheng, Xunlun Liu, Junxiu BMC Ophthalmol Research BACKGROUND: Keratoconus (KC) is a complex, non-inflammatory corneal degenerative disease. Although numerous studies have analyzed the correlation of SNP rs1324183, which located in MPDZ-NF1B gene, and KC in different populations, only few findings were repeated. In this study, to evaluate the association between rs1324183 and KC in a new independent Chinese population, we performed a replication study of the significantly associated rs1324183. METHODS: In total of 114 unrelated KC patients and 88 unrelated controls were recruited from Ningxia, China. We detected the genotypes and alleles of rs1324183 using PCR technology and Sanger sequencing and also analyzed the association between this locus and KC, its clinical parameters by statistical methods. RESULTS: The frequency of genotype AA (11, 9.6%) and genotypes containing allele A (47, 41.2%) of rs1324183 in KC were both higher than those of the control group. And genotype AA of rs1324183 conferred a higher risk of KC (OR > 1). Moreover, corneal parameter Belin/Ambrósio enhanced ectasia display final D value (BAD-D) had significant correlation (p = 0.002) with AA genotype of rs1324183 in KC. CONCLUSIONS: Our replication study indicates that the results of rs1324183 associated with KC in our population is robust and further better illustrates the significance of BAD-D as a diagnostic indicator for KC. rs1324183 should be considered as the first genetic mark of KC risk in its future diagnosis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12886-022-02359-1. BioMed Central 2022-03-19 /pmc/articles/PMC8934471/ /pubmed/35305607 http://dx.doi.org/10.1186/s12886-022-02359-1 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Yuan, Shiqin Li, Dong Ma, Meijiao Zhou, Lingjie Ma, Zhen Shi, Baoyu Zhang, Shuang Li, Huiping Sheng, Xunlun Liu, Junxiu Evaluating the association between MPDZ-NF1B rs1324183 and keratoconus in an independent northwestern Chinese population |
title | Evaluating the association between MPDZ-NF1B rs1324183 and keratoconus in an independent northwestern Chinese population |
title_full | Evaluating the association between MPDZ-NF1B rs1324183 and keratoconus in an independent northwestern Chinese population |
title_fullStr | Evaluating the association between MPDZ-NF1B rs1324183 and keratoconus in an independent northwestern Chinese population |
title_full_unstemmed | Evaluating the association between MPDZ-NF1B rs1324183 and keratoconus in an independent northwestern Chinese population |
title_short | Evaluating the association between MPDZ-NF1B rs1324183 and keratoconus in an independent northwestern Chinese population |
title_sort | evaluating the association between mpdz-nf1b rs1324183 and keratoconus in an independent northwestern chinese population |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8934471/ https://www.ncbi.nlm.nih.gov/pubmed/35305607 http://dx.doi.org/10.1186/s12886-022-02359-1 |
work_keys_str_mv | AT yuanshiqin evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT lidong evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT mameijiao evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT zhoulingjie evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT mazhen evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT shibaoyu evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT zhangshuang evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT lihuiping evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT shengxunlun evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation AT liujunxiu evaluatingtheassociationbetweenmpdznf1brs1324183andkeratoconusinanindependentnorthwesternchinesepopulation |