Cargando…

Statistical practice and transparent reporting in the neurosciences: Preclinical motor behavioral experiments

Longitudinal and behavioral preclinical animal studies generate complex data, which may not be well matched to statistical approaches common in this literature. Analyses that do not adequately account for complexity may result in overly optimistic study conclusions, with consequences for reproducibi...

Descripción completa

Detalles Bibliográficos
Autores principales: Hogue, Olivia, Harvey, Tucker, Crozier, Dena, Sonneborn, Claire, Postle, Abagail, Block-Beach, Hunter, Somasundaram, Eashwar, May, Francis J., Snyder Braun, Monica, Pasadyn, Felicia L., King, Khandi, Johnson, Casandra, Dolansky, Mary A., Obuchowski, Nancy A., Machado, Andre G., Baker, Kenneth B., Barnholtz-Sloan, Jill S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8936466/
https://www.ncbi.nlm.nih.gov/pubmed/35312695
http://dx.doi.org/10.1371/journal.pone.0265154
_version_ 1784672225071202304
author Hogue, Olivia
Harvey, Tucker
Crozier, Dena
Sonneborn, Claire
Postle, Abagail
Block-Beach, Hunter
Somasundaram, Eashwar
May, Francis J.
Snyder Braun, Monica
Pasadyn, Felicia L.
King, Khandi
Johnson, Casandra
Dolansky, Mary A.
Obuchowski, Nancy A.
Machado, Andre G.
Baker, Kenneth B.
Barnholtz-Sloan, Jill S.
author_facet Hogue, Olivia
Harvey, Tucker
Crozier, Dena
Sonneborn, Claire
Postle, Abagail
Block-Beach, Hunter
Somasundaram, Eashwar
May, Francis J.
Snyder Braun, Monica
Pasadyn, Felicia L.
King, Khandi
Johnson, Casandra
Dolansky, Mary A.
Obuchowski, Nancy A.
Machado, Andre G.
Baker, Kenneth B.
Barnholtz-Sloan, Jill S.
author_sort Hogue, Olivia
collection PubMed
description Longitudinal and behavioral preclinical animal studies generate complex data, which may not be well matched to statistical approaches common in this literature. Analyses that do not adequately account for complexity may result in overly optimistic study conclusions, with consequences for reproducibility and translational decision-making. Recent work interrogating methodological shortcomings in animal research has not yet comprehensively investigated statistical shortcomings in the analysis of complex longitudinal and behavioral data. To this end, the current cross-sectional meta-research study rigorously reviewed published mouse or rat controlled experiments for motor rehabilitation in three neurologic conditions to evaluate statistical choices and reporting. Medline via PubMed was queried in February 2020 for English-language articles published January 1, 2017- December 31, 2019. Included were articles that used rat or mouse models of stroke, Parkinson’s disease, or traumatic brain injury, employed a therapeutic controlled experimental design to determine efficacy, and assessed at least one functional behavioral assessment or global evaluation of function. 241 articles from 99 journals were evaluated independently by a team of nine raters. Articles were assessed for statistical handling of non-independence, animal attrition, outliers, ordinal data, and multiplicity. Exploratory analyses evaluated whether transparency or statistical choices differed as a function of journal factors. A majority of articles failed to account for sources of non-independence in the data (74–93%) and/or did not analytically account for mid-treatment animal attrition (78%). Ordinal variables were often treated as continuous (37%), outliers were predominantly not mentioned (83%), and plots often concealed the distribution of the data (51%) Statistical choices and transparency did not differ with regards to journal rank or reporting requirements. Statistical misapplication can result in invalid experimental findings and inadequate reporting obscures errors. Clinician-scientists evaluating preclinical work for translational promise should be mindful of commonplace errors. Interventions are needed to improve statistical decision-making in preclinical behavioral neurosciences research.
format Online
Article
Text
id pubmed-8936466
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-89364662022-03-22 Statistical practice and transparent reporting in the neurosciences: Preclinical motor behavioral experiments Hogue, Olivia Harvey, Tucker Crozier, Dena Sonneborn, Claire Postle, Abagail Block-Beach, Hunter Somasundaram, Eashwar May, Francis J. Snyder Braun, Monica Pasadyn, Felicia L. King, Khandi Johnson, Casandra Dolansky, Mary A. Obuchowski, Nancy A. Machado, Andre G. Baker, Kenneth B. Barnholtz-Sloan, Jill S. PLoS One Research Article Longitudinal and behavioral preclinical animal studies generate complex data, which may not be well matched to statistical approaches common in this literature. Analyses that do not adequately account for complexity may result in overly optimistic study conclusions, with consequences for reproducibility and translational decision-making. Recent work interrogating methodological shortcomings in animal research has not yet comprehensively investigated statistical shortcomings in the analysis of complex longitudinal and behavioral data. To this end, the current cross-sectional meta-research study rigorously reviewed published mouse or rat controlled experiments for motor rehabilitation in three neurologic conditions to evaluate statistical choices and reporting. Medline via PubMed was queried in February 2020 for English-language articles published January 1, 2017- December 31, 2019. Included were articles that used rat or mouse models of stroke, Parkinson’s disease, or traumatic brain injury, employed a therapeutic controlled experimental design to determine efficacy, and assessed at least one functional behavioral assessment or global evaluation of function. 241 articles from 99 journals were evaluated independently by a team of nine raters. Articles were assessed for statistical handling of non-independence, animal attrition, outliers, ordinal data, and multiplicity. Exploratory analyses evaluated whether transparency or statistical choices differed as a function of journal factors. A majority of articles failed to account for sources of non-independence in the data (74–93%) and/or did not analytically account for mid-treatment animal attrition (78%). Ordinal variables were often treated as continuous (37%), outliers were predominantly not mentioned (83%), and plots often concealed the distribution of the data (51%) Statistical choices and transparency did not differ with regards to journal rank or reporting requirements. Statistical misapplication can result in invalid experimental findings and inadequate reporting obscures errors. Clinician-scientists evaluating preclinical work for translational promise should be mindful of commonplace errors. Interventions are needed to improve statistical decision-making in preclinical behavioral neurosciences research. Public Library of Science 2022-03-21 /pmc/articles/PMC8936466/ /pubmed/35312695 http://dx.doi.org/10.1371/journal.pone.0265154 Text en https://creativecommons.org/publicdomain/zero/1.0/This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Hogue, Olivia
Harvey, Tucker
Crozier, Dena
Sonneborn, Claire
Postle, Abagail
Block-Beach, Hunter
Somasundaram, Eashwar
May, Francis J.
Snyder Braun, Monica
Pasadyn, Felicia L.
King, Khandi
Johnson, Casandra
Dolansky, Mary A.
Obuchowski, Nancy A.
Machado, Andre G.
Baker, Kenneth B.
Barnholtz-Sloan, Jill S.
Statistical practice and transparent reporting in the neurosciences: Preclinical motor behavioral experiments
title Statistical practice and transparent reporting in the neurosciences: Preclinical motor behavioral experiments
title_full Statistical practice and transparent reporting in the neurosciences: Preclinical motor behavioral experiments
title_fullStr Statistical practice and transparent reporting in the neurosciences: Preclinical motor behavioral experiments
title_full_unstemmed Statistical practice and transparent reporting in the neurosciences: Preclinical motor behavioral experiments
title_short Statistical practice and transparent reporting in the neurosciences: Preclinical motor behavioral experiments
title_sort statistical practice and transparent reporting in the neurosciences: preclinical motor behavioral experiments
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8936466/
https://www.ncbi.nlm.nih.gov/pubmed/35312695
http://dx.doi.org/10.1371/journal.pone.0265154
work_keys_str_mv AT hogueolivia statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT harveytucker statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT crozierdena statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT sonnebornclaire statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT postleabagail statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT blockbeachhunter statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT somasundarameashwar statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT mayfrancisj statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT snyderbraunmonica statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT pasadynfelicial statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT kingkhandi statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT johnsoncasandra statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT dolanskymarya statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT obuchowskinancya statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT machadoandreg statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT bakerkennethb statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments
AT barnholtzsloanjills statisticalpracticeandtransparentreportingintheneurosciencespreclinicalmotorbehavioralexperiments