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Personalized pathology test for Cardio-vascular disease: Approximate Bayesian computation with discriminative summary statistics learning

Cardio/cerebrovascular diseases (CVD) have become one of the major health issue in our societies. But recent studies show that the present pathology tests to detect CVD are ineffectual as they do not consider different stages of platelet activation or the molecular dynamics involved in platelet inte...

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Autores principales: Dutta, Ritabrata, Zouaoui Boudjeltia, Karim, Kotsalos, Christos, Rousseau, Alexandre, Ribeiro de Sousa, Daniel, Desmet, Jean-Marc, Van Meerhaeghe, Alain, Mira, Antonietta, Chopard, Bastien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8939803/
https://www.ncbi.nlm.nih.gov/pubmed/35271585
http://dx.doi.org/10.1371/journal.pcbi.1009910
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author Dutta, Ritabrata
Zouaoui Boudjeltia, Karim
Kotsalos, Christos
Rousseau, Alexandre
Ribeiro de Sousa, Daniel
Desmet, Jean-Marc
Van Meerhaeghe, Alain
Mira, Antonietta
Chopard, Bastien
author_facet Dutta, Ritabrata
Zouaoui Boudjeltia, Karim
Kotsalos, Christos
Rousseau, Alexandre
Ribeiro de Sousa, Daniel
Desmet, Jean-Marc
Van Meerhaeghe, Alain
Mira, Antonietta
Chopard, Bastien
author_sort Dutta, Ritabrata
collection PubMed
description Cardio/cerebrovascular diseases (CVD) have become one of the major health issue in our societies. But recent studies show that the present pathology tests to detect CVD are ineffectual as they do not consider different stages of platelet activation or the molecular dynamics involved in platelet interactions and are incapable to consider inter-individual variability. Here we propose a stochastic platelet deposition model and an inferential scheme to estimate the biologically meaningful model parameters using approximate Bayesian computation with a summary statistic that maximally discriminates between different types of patients. Inferred parameters from data collected on healthy volunteers and different patient types help us to identify specific biological parameters and hence biological reasoning behind the dysfunction for each type of patients. This work opens up an unprecedented opportunity of personalized pathology test for CVD detection and medical treatment.
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spelling pubmed-89398032022-03-23 Personalized pathology test for Cardio-vascular disease: Approximate Bayesian computation with discriminative summary statistics learning Dutta, Ritabrata Zouaoui Boudjeltia, Karim Kotsalos, Christos Rousseau, Alexandre Ribeiro de Sousa, Daniel Desmet, Jean-Marc Van Meerhaeghe, Alain Mira, Antonietta Chopard, Bastien PLoS Comput Biol Research Article Cardio/cerebrovascular diseases (CVD) have become one of the major health issue in our societies. But recent studies show that the present pathology tests to detect CVD are ineffectual as they do not consider different stages of platelet activation or the molecular dynamics involved in platelet interactions and are incapable to consider inter-individual variability. Here we propose a stochastic platelet deposition model and an inferential scheme to estimate the biologically meaningful model parameters using approximate Bayesian computation with a summary statistic that maximally discriminates between different types of patients. Inferred parameters from data collected on healthy volunteers and different patient types help us to identify specific biological parameters and hence biological reasoning behind the dysfunction for each type of patients. This work opens up an unprecedented opportunity of personalized pathology test for CVD detection and medical treatment. Public Library of Science 2022-03-10 /pmc/articles/PMC8939803/ /pubmed/35271585 http://dx.doi.org/10.1371/journal.pcbi.1009910 Text en © 2022 Dutta et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Dutta, Ritabrata
Zouaoui Boudjeltia, Karim
Kotsalos, Christos
Rousseau, Alexandre
Ribeiro de Sousa, Daniel
Desmet, Jean-Marc
Van Meerhaeghe, Alain
Mira, Antonietta
Chopard, Bastien
Personalized pathology test for Cardio-vascular disease: Approximate Bayesian computation with discriminative summary statistics learning
title Personalized pathology test for Cardio-vascular disease: Approximate Bayesian computation with discriminative summary statistics learning
title_full Personalized pathology test for Cardio-vascular disease: Approximate Bayesian computation with discriminative summary statistics learning
title_fullStr Personalized pathology test for Cardio-vascular disease: Approximate Bayesian computation with discriminative summary statistics learning
title_full_unstemmed Personalized pathology test for Cardio-vascular disease: Approximate Bayesian computation with discriminative summary statistics learning
title_short Personalized pathology test for Cardio-vascular disease: Approximate Bayesian computation with discriminative summary statistics learning
title_sort personalized pathology test for cardio-vascular disease: approximate bayesian computation with discriminative summary statistics learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8939803/
https://www.ncbi.nlm.nih.gov/pubmed/35271585
http://dx.doi.org/10.1371/journal.pcbi.1009910
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