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The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)
Primulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast geno...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8942498/ https://www.ncbi.nlm.nih.gov/pubmed/35342793 http://dx.doi.org/10.1080/23802359.2021.2011446 |
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author | Peng, Tao Tang, Luyan Zeng, Zhiruo Zhang, Tianyun Wang, Jinyi Zhou, Xuping Zhu, Bin Du, Xueye Wen, Fang |
author_facet | Peng, Tao Tang, Luyan Zeng, Zhiruo Zhang, Tianyun Wang, Jinyi Zhou, Xuping Zhu, Bin Du, Xueye Wen, Fang |
author_sort | Peng, Tao |
collection | PubMed |
description | Primulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast genome of P. tenuituba was assembled and characterized for the first time. The complete chloroplast genome exhibited a typical quadripartite cycle of 153,236 bp in length, including a pair of inverted repeats (IRs) of 25,494 bp, which were separated by a large single-copy (LSC) region of 84,364 bp and a small single copy (SSC) region of 17,884 bp. The GC content was 37.6%. The complete chloroplast genome of P. tenuituba contains 114 genes, including 80 protein-coding genes, 30 tRNAs genes, and four rRNAs. The phylogenetic analysis showed that P. tenuituba is closely related to P. eburnea. The newly reported chloroplast genome of P. tenuituba would provide valuable data for further studies on its evolution and adaptation mechanism. |
format | Online Article Text |
id | pubmed-8942498 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-89424982022-03-24 The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) Peng, Tao Tang, Luyan Zeng, Zhiruo Zhang, Tianyun Wang, Jinyi Zhou, Xuping Zhu, Bin Du, Xueye Wen, Fang Mitochondrial DNA B Resour Mitogenome Announcement Primulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast genome of P. tenuituba was assembled and characterized for the first time. The complete chloroplast genome exhibited a typical quadripartite cycle of 153,236 bp in length, including a pair of inverted repeats (IRs) of 25,494 bp, which were separated by a large single-copy (LSC) region of 84,364 bp and a small single copy (SSC) region of 17,884 bp. The GC content was 37.6%. The complete chloroplast genome of P. tenuituba contains 114 genes, including 80 protein-coding genes, 30 tRNAs genes, and four rRNAs. The phylogenetic analysis showed that P. tenuituba is closely related to P. eburnea. The newly reported chloroplast genome of P. tenuituba would provide valuable data for further studies on its evolution and adaptation mechanism. Taylor & Francis 2022-03-17 /pmc/articles/PMC8942498/ /pubmed/35342793 http://dx.doi.org/10.1080/23802359.2021.2011446 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Peng, Tao Tang, Luyan Zeng, Zhiruo Zhang, Tianyun Wang, Jinyi Zhou, Xuping Zhu, Bin Du, Xueye Wen, Fang The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
title | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
title_full | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
title_fullStr | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
title_full_unstemmed | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
title_short | The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) |
title_sort | complete chloroplast genome of a karst-dwelling plant primulina tenuituba (gesneriaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8942498/ https://www.ncbi.nlm.nih.gov/pubmed/35342793 http://dx.doi.org/10.1080/23802359.2021.2011446 |
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