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The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)

Primulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast geno...

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Autores principales: Peng, Tao, Tang, Luyan, Zeng, Zhiruo, Zhang, Tianyun, Wang, Jinyi, Zhou, Xuping, Zhu, Bin, Du, Xueye, Wen, Fang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8942498/
https://www.ncbi.nlm.nih.gov/pubmed/35342793
http://dx.doi.org/10.1080/23802359.2021.2011446
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author Peng, Tao
Tang, Luyan
Zeng, Zhiruo
Zhang, Tianyun
Wang, Jinyi
Zhou, Xuping
Zhu, Bin
Du, Xueye
Wen, Fang
author_facet Peng, Tao
Tang, Luyan
Zeng, Zhiruo
Zhang, Tianyun
Wang, Jinyi
Zhou, Xuping
Zhu, Bin
Du, Xueye
Wen, Fang
author_sort Peng, Tao
collection PubMed
description Primulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast genome of P. tenuituba was assembled and characterized for the first time. The complete chloroplast genome exhibited a typical quadripartite cycle of 153,236 bp in length, including a pair of inverted repeats (IRs) of 25,494 bp, which were separated by a large single-copy (LSC) region of 84,364 bp and a small single copy (SSC) region of 17,884 bp. The GC content was 37.6%. The complete chloroplast genome of P. tenuituba contains 114 genes, including 80 protein-coding genes, 30 tRNAs genes, and four rRNAs. The phylogenetic analysis showed that P. tenuituba is closely related to P. eburnea. The newly reported chloroplast genome of P. tenuituba would provide valuable data for further studies on its evolution and adaptation mechanism.
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spelling pubmed-89424982022-03-24 The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae) Peng, Tao Tang, Luyan Zeng, Zhiruo Zhang, Tianyun Wang, Jinyi Zhou, Xuping Zhu, Bin Du, Xueye Wen, Fang Mitochondrial DNA B Resour Mitogenome Announcement Primulina tenuituba is a species in the Gesneriaceae family that is widely distributed in China. It is a karst-dwelling species with an enormous tolerance for extreme drought and high temperatures. The species is also used in traditional Chinese medicine. In this study, the complete chloroplast genome of P. tenuituba was assembled and characterized for the first time. The complete chloroplast genome exhibited a typical quadripartite cycle of 153,236 bp in length, including a pair of inverted repeats (IRs) of 25,494 bp, which were separated by a large single-copy (LSC) region of 84,364 bp and a small single copy (SSC) region of 17,884 bp. The GC content was 37.6%. The complete chloroplast genome of P. tenuituba contains 114 genes, including 80 protein-coding genes, 30 tRNAs genes, and four rRNAs. The phylogenetic analysis showed that P. tenuituba is closely related to P. eburnea. The newly reported chloroplast genome of P. tenuituba would provide valuable data for further studies on its evolution and adaptation mechanism. Taylor & Francis 2022-03-17 /pmc/articles/PMC8942498/ /pubmed/35342793 http://dx.doi.org/10.1080/23802359.2021.2011446 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Peng, Tao
Tang, Luyan
Zeng, Zhiruo
Zhang, Tianyun
Wang, Jinyi
Zhou, Xuping
Zhu, Bin
Du, Xueye
Wen, Fang
The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)
title The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)
title_full The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)
title_fullStr The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)
title_full_unstemmed The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)
title_short The complete chloroplast genome of a karst-dwelling plant Primulina tenuituba (Gesneriaceae)
title_sort complete chloroplast genome of a karst-dwelling plant primulina tenuituba (gesneriaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8942498/
https://www.ncbi.nlm.nih.gov/pubmed/35342793
http://dx.doi.org/10.1080/23802359.2021.2011446
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