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Dysbiosis of Gastric Mucosal Fungal Microbiota in the Gastric Cancer Microenvironment
BACKGROUND: Microbes have been shown to contribute to gastric cancer (GC), gastric bacteria and viruses are associated with gastric carcinogenesis. However, the relationship between gastric fungi and GC is still unclear. Our aim was to evaluate the gastric fungal microbiota in the GC microenvironmen...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8942701/ https://www.ncbi.nlm.nih.gov/pubmed/35340583 http://dx.doi.org/10.1155/2022/6011632 |
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author | Zhang, Zhenzhan Feng, Hao Qiu, Yaopeng Xu, Zhou Xie, Qingfeng Ding, Wenfu Liu, Hao Li, Guoxin |
author_facet | Zhang, Zhenzhan Feng, Hao Qiu, Yaopeng Xu, Zhou Xie, Qingfeng Ding, Wenfu Liu, Hao Li, Guoxin |
author_sort | Zhang, Zhenzhan |
collection | PubMed |
description | BACKGROUND: Microbes have been shown to contribute to gastric cancer (GC), gastric bacteria and viruses are associated with gastric carcinogenesis. However, the relationship between gastric fungi and GC is still unclear. Our aim was to evaluate the gastric fungal microbiota in the GC microenvironment. METHODS: Gastric fungal microbiome profiling was performed with internal transcribed spacer (ITS) rDNA sequencing in primary tumor and corresponding paired normal mucosal tissues from 61 GC patients. Differences in microbial composition, taxa diversity, and predicted function were further analyzed. RESULTS: Dysbiosis of gastric mucosal fungal microbiome was observed between the tumor and normal groups in GC. The tumor group had a higher abundance of certain taxa than the normal group. In the taxa classification, the abundances of Pezizomycetes, Sordariales, Chaetomiaceae, and Rozellomycota were lower in the tumor group than in the normal group. At the genus level, Solicoccozyma (P = 0.033) was found in higher abundance and was differentially enriched in the tumor group with Lefse analysis. Additionally, Solicoccozyma accounted for 0.3% of gastric fungi in the GC microenvironment. Twenty-seven of the 61 GC patients showed positive Solicoccozyma expression in tumors. Solicoccozyma-positive expression in tumors was associated with the Bormann classification and nerve invasion. Solicoccozyma was considered a gastric fungal marker to classify stage I and stage II-IV GC patients with an area under the receiver-operating curve (AUC) of 0.7061, as well as to classify the nerve invasive and nonnerve invasive tumors from GC patients with an AUC of 0.6978. Functional prediction indicated that the positive expression of Solicoccozyma in tumors was associated with the amino acid- and carbohydrate-related metabolic pathways in GC. CONCLUSIONS: This study revealed a novel perspective on the role of Solicoccozyma in tumors and a theoretical basis for therapeutic targets against GC. |
format | Online Article Text |
id | pubmed-8942701 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-89427012022-03-24 Dysbiosis of Gastric Mucosal Fungal Microbiota in the Gastric Cancer Microenvironment Zhang, Zhenzhan Feng, Hao Qiu, Yaopeng Xu, Zhou Xie, Qingfeng Ding, Wenfu Liu, Hao Li, Guoxin J Immunol Res Research Article BACKGROUND: Microbes have been shown to contribute to gastric cancer (GC), gastric bacteria and viruses are associated with gastric carcinogenesis. However, the relationship between gastric fungi and GC is still unclear. Our aim was to evaluate the gastric fungal microbiota in the GC microenvironment. METHODS: Gastric fungal microbiome profiling was performed with internal transcribed spacer (ITS) rDNA sequencing in primary tumor and corresponding paired normal mucosal tissues from 61 GC patients. Differences in microbial composition, taxa diversity, and predicted function were further analyzed. RESULTS: Dysbiosis of gastric mucosal fungal microbiome was observed between the tumor and normal groups in GC. The tumor group had a higher abundance of certain taxa than the normal group. In the taxa classification, the abundances of Pezizomycetes, Sordariales, Chaetomiaceae, and Rozellomycota were lower in the tumor group than in the normal group. At the genus level, Solicoccozyma (P = 0.033) was found in higher abundance and was differentially enriched in the tumor group with Lefse analysis. Additionally, Solicoccozyma accounted for 0.3% of gastric fungi in the GC microenvironment. Twenty-seven of the 61 GC patients showed positive Solicoccozyma expression in tumors. Solicoccozyma-positive expression in tumors was associated with the Bormann classification and nerve invasion. Solicoccozyma was considered a gastric fungal marker to classify stage I and stage II-IV GC patients with an area under the receiver-operating curve (AUC) of 0.7061, as well as to classify the nerve invasive and nonnerve invasive tumors from GC patients with an AUC of 0.6978. Functional prediction indicated that the positive expression of Solicoccozyma in tumors was associated with the amino acid- and carbohydrate-related metabolic pathways in GC. CONCLUSIONS: This study revealed a novel perspective on the role of Solicoccozyma in tumors and a theoretical basis for therapeutic targets against GC. Hindawi 2022-03-16 /pmc/articles/PMC8942701/ /pubmed/35340583 http://dx.doi.org/10.1155/2022/6011632 Text en Copyright © 2022 Zhenzhan Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhang, Zhenzhan Feng, Hao Qiu, Yaopeng Xu, Zhou Xie, Qingfeng Ding, Wenfu Liu, Hao Li, Guoxin Dysbiosis of Gastric Mucosal Fungal Microbiota in the Gastric Cancer Microenvironment |
title | Dysbiosis of Gastric Mucosal Fungal Microbiota in the Gastric Cancer Microenvironment |
title_full | Dysbiosis of Gastric Mucosal Fungal Microbiota in the Gastric Cancer Microenvironment |
title_fullStr | Dysbiosis of Gastric Mucosal Fungal Microbiota in the Gastric Cancer Microenvironment |
title_full_unstemmed | Dysbiosis of Gastric Mucosal Fungal Microbiota in the Gastric Cancer Microenvironment |
title_short | Dysbiosis of Gastric Mucosal Fungal Microbiota in the Gastric Cancer Microenvironment |
title_sort | dysbiosis of gastric mucosal fungal microbiota in the gastric cancer microenvironment |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8942701/ https://www.ncbi.nlm.nih.gov/pubmed/35340583 http://dx.doi.org/10.1155/2022/6011632 |
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