Cargando…
Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database
Magnetic resonance imaging (MRI) is widely utilized for diagnosing and monitoring of spinal disorders. For a number of applications, particularly those related to quantitative MRI, an essential step towards achieving reliable and objective measurements is the segmentation of the examined structures....
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8943029/ https://www.ncbi.nlm.nih.gov/pubmed/35322028 http://dx.doi.org/10.1038/s41597-022-01222-8 |
_version_ | 1784673431375052800 |
---|---|
author | Khalil, Yasmina Al Becherucci, Edoardo A. Kirschke, Jan S. Karampinos, Dimitrios C. Breeuwer, Marcel Baum, Thomas Sollmann, Nico |
author_facet | Khalil, Yasmina Al Becherucci, Edoardo A. Kirschke, Jan S. Karampinos, Dimitrios C. Breeuwer, Marcel Baum, Thomas Sollmann, Nico |
author_sort | Khalil, Yasmina Al |
collection | PubMed |
description | Magnetic resonance imaging (MRI) is widely utilized for diagnosing and monitoring of spinal disorders. For a number of applications, particularly those related to quantitative MRI, an essential step towards achieving reliable and objective measurements is the segmentation of the examined structures. Performed manually, such process is time-consuming and prone to errors, posing a bottleneck to its clinical applicability. A more efficient analysis would be achieved by automating a segmentation process. However, routine spine MRI acquisitions pose several challenges for achieving robust and accurate segmentations, due to varying MRI acquisition characteristics occurring in data acquired from different sites. Moreover, heterogeneous annotated datasets, collected from multiple scanners with different pulse sequence protocols, are limited. Thus, we present a manually segmented lumbar spine MRI database containing a wide range of data obtained from multiple scanners and pulse sequences, with segmentations of lumbar vertebral bodies and intervertebral discs. The database is intended for the use in developing and testing of automated lumbar spine segmentation algorithms in multi-domain scenarios. |
format | Online Article Text |
id | pubmed-8943029 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-89430292022-04-08 Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database Khalil, Yasmina Al Becherucci, Edoardo A. Kirschke, Jan S. Karampinos, Dimitrios C. Breeuwer, Marcel Baum, Thomas Sollmann, Nico Sci Data Data Descriptor Magnetic resonance imaging (MRI) is widely utilized for diagnosing and monitoring of spinal disorders. For a number of applications, particularly those related to quantitative MRI, an essential step towards achieving reliable and objective measurements is the segmentation of the examined structures. Performed manually, such process is time-consuming and prone to errors, posing a bottleneck to its clinical applicability. A more efficient analysis would be achieved by automating a segmentation process. However, routine spine MRI acquisitions pose several challenges for achieving robust and accurate segmentations, due to varying MRI acquisition characteristics occurring in data acquired from different sites. Moreover, heterogeneous annotated datasets, collected from multiple scanners with different pulse sequence protocols, are limited. Thus, we present a manually segmented lumbar spine MRI database containing a wide range of data obtained from multiple scanners and pulse sequences, with segmentations of lumbar vertebral bodies and intervertebral discs. The database is intended for the use in developing and testing of automated lumbar spine segmentation algorithms in multi-domain scenarios. Nature Publishing Group UK 2022-03-23 /pmc/articles/PMC8943029/ /pubmed/35322028 http://dx.doi.org/10.1038/s41597-022-01222-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Data Descriptor Khalil, Yasmina Al Becherucci, Edoardo A. Kirschke, Jan S. Karampinos, Dimitrios C. Breeuwer, Marcel Baum, Thomas Sollmann, Nico Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database |
title | Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database |
title_full | Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database |
title_fullStr | Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database |
title_full_unstemmed | Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database |
title_short | Multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database |
title_sort | multi-scanner and multi-modal lumbar vertebral body and intervertebral disc segmentation database |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8943029/ https://www.ncbi.nlm.nih.gov/pubmed/35322028 http://dx.doi.org/10.1038/s41597-022-01222-8 |
work_keys_str_mv | AT khalilyasminaal multiscannerandmultimodallumbarvertebralbodyandintervertebraldiscsegmentationdatabase AT becherucciedoardoa multiscannerandmultimodallumbarvertebralbodyandintervertebraldiscsegmentationdatabase AT kirschkejans multiscannerandmultimodallumbarvertebralbodyandintervertebraldiscsegmentationdatabase AT karampinosdimitriosc multiscannerandmultimodallumbarvertebralbodyandintervertebraldiscsegmentationdatabase AT breeuwermarcel multiscannerandmultimodallumbarvertebralbodyandintervertebraldiscsegmentationdatabase AT baumthomas multiscannerandmultimodallumbarvertebralbodyandintervertebraldiscsegmentationdatabase AT sollmannnico multiscannerandmultimodallumbarvertebralbodyandintervertebraldiscsegmentationdatabase |