Cargando…

Evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors

SIGNIFICANCE: Diffuse optical tomography is an ill-posed problem. Combination with ultrasound can improve the results of diffuse optical tomography applied to the diagnosis of breast cancer and allow for classification of lesions. AIM: To provide a simulation pipeline for the assessment of reconstru...

Descripción completa

Detalles Bibliográficos
Autores principales: Di Sciacca, Giuseppe, Maffeis, Giulia, Farina, Andrea, Dalla Mora, Alberto, Pifferi, Antonio, Taroni, Paola, Arridge, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8943242/
https://www.ncbi.nlm.nih.gov/pubmed/35332743
http://dx.doi.org/10.1117/1.JBO.27.3.036003
_version_ 1784673475400564736
author Di Sciacca, Giuseppe
Maffeis, Giulia
Farina, Andrea
Dalla Mora, Alberto
Pifferi, Antonio
Taroni, Paola
Arridge, Simon
author_facet Di Sciacca, Giuseppe
Maffeis, Giulia
Farina, Andrea
Dalla Mora, Alberto
Pifferi, Antonio
Taroni, Paola
Arridge, Simon
author_sort Di Sciacca, Giuseppe
collection PubMed
description SIGNIFICANCE: Diffuse optical tomography is an ill-posed problem. Combination with ultrasound can improve the results of diffuse optical tomography applied to the diagnosis of breast cancer and allow for classification of lesions. AIM: To provide a simulation pipeline for the assessment of reconstruction and classification methods for diffuse optical tomography with concurrent ultrasound information. APPROACH: A set of breast digital phantoms with benign and malignant lesions was simulated building on the software VICTRE. Acoustic and optical properties were assigned to the phantoms for the generation of B-mode images and optical data. A reconstruction algorithm based on a two-region nonlinear fitting and incorporating the ultrasound information was tested. Machine learning classification methods were applied to the reconstructed values to discriminate lesions into benign and malignant after reconstruction. RESULTS: The approach allowed us to generate realistic US and optical data and to test a two-region reconstruction method for a large number of realistic simulations. When information is extracted from ultrasound images, at least 75% of lesions are correctly classified. With ideal two-region separation, the accuracy is higher than 80%. CONCLUSIONS: A pipeline for the generation of realistic ultrasound and diffuse optics data was implemented. Machine learning methods applied to a optical reconstruction with a nonlinear optical model and morphological information permit to discriminate malignant lesions from benign ones.
format Online
Article
Text
id pubmed-8943242
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Society of Photo-Optical Instrumentation Engineers
record_format MEDLINE/PubMed
spelling pubmed-89432422022-03-29 Evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors Di Sciacca, Giuseppe Maffeis, Giulia Farina, Andrea Dalla Mora, Alberto Pifferi, Antonio Taroni, Paola Arridge, Simon J Biomed Opt Imaging SIGNIFICANCE: Diffuse optical tomography is an ill-posed problem. Combination with ultrasound can improve the results of diffuse optical tomography applied to the diagnosis of breast cancer and allow for classification of lesions. AIM: To provide a simulation pipeline for the assessment of reconstruction and classification methods for diffuse optical tomography with concurrent ultrasound information. APPROACH: A set of breast digital phantoms with benign and malignant lesions was simulated building on the software VICTRE. Acoustic and optical properties were assigned to the phantoms for the generation of B-mode images and optical data. A reconstruction algorithm based on a two-region nonlinear fitting and incorporating the ultrasound information was tested. Machine learning classification methods were applied to the reconstructed values to discriminate lesions into benign and malignant after reconstruction. RESULTS: The approach allowed us to generate realistic US and optical data and to test a two-region reconstruction method for a large number of realistic simulations. When information is extracted from ultrasound images, at least 75% of lesions are correctly classified. With ideal two-region separation, the accuracy is higher than 80%. CONCLUSIONS: A pipeline for the generation of realistic ultrasound and diffuse optics data was implemented. Machine learning methods applied to a optical reconstruction with a nonlinear optical model and morphological information permit to discriminate malignant lesions from benign ones. Society of Photo-Optical Instrumentation Engineers 2022-03-24 2022-03 /pmc/articles/PMC8943242/ /pubmed/35332743 http://dx.doi.org/10.1117/1.JBO.27.3.036003 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/Published by SPIE under a Creative Commons Attribution 4.0 International License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Imaging
Di Sciacca, Giuseppe
Maffeis, Giulia
Farina, Andrea
Dalla Mora, Alberto
Pifferi, Antonio
Taroni, Paola
Arridge, Simon
Evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors
title Evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors
title_full Evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors
title_fullStr Evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors
title_full_unstemmed Evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors
title_short Evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors
title_sort evaluation of a pipeline for simulation, reconstruction, and classification in ultrasound-aided diffuse optical tomography of breast tumors
topic Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8943242/
https://www.ncbi.nlm.nih.gov/pubmed/35332743
http://dx.doi.org/10.1117/1.JBO.27.3.036003
work_keys_str_mv AT disciaccagiuseppe evaluationofapipelineforsimulationreconstructionandclassificationinultrasoundaideddiffuseopticaltomographyofbreasttumors
AT maffeisgiulia evaluationofapipelineforsimulationreconstructionandclassificationinultrasoundaideddiffuseopticaltomographyofbreasttumors
AT farinaandrea evaluationofapipelineforsimulationreconstructionandclassificationinultrasoundaideddiffuseopticaltomographyofbreasttumors
AT dallamoraalberto evaluationofapipelineforsimulationreconstructionandclassificationinultrasoundaideddiffuseopticaltomographyofbreasttumors
AT pifferiantonio evaluationofapipelineforsimulationreconstructionandclassificationinultrasoundaideddiffuseopticaltomographyofbreasttumors
AT taronipaola evaluationofapipelineforsimulationreconstructionandclassificationinultrasoundaideddiffuseopticaltomographyofbreasttumors
AT arridgesimon evaluationofapipelineforsimulationreconstructionandclassificationinultrasoundaideddiffuseopticaltomographyofbreasttumors