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A practical guide to applying machine learning to infant EEG data

Electroencephalography (EEG) has been widely adopted by the developmental cognitive neuroscience community, but the application of machine learning (ML) in this domain lags behind adult EEG studies. Applying ML to infant data is particularly challenging due to the low number of trials, low signal-to...

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Autores principales: Ng, Bernard, Reh, Rebecca K., Mostafavi, Sara
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8943418/
https://www.ncbi.nlm.nih.gov/pubmed/35334336
http://dx.doi.org/10.1016/j.dcn.2022.101096
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author Ng, Bernard
Reh, Rebecca K.
Mostafavi, Sara
author_facet Ng, Bernard
Reh, Rebecca K.
Mostafavi, Sara
author_sort Ng, Bernard
collection PubMed
description Electroencephalography (EEG) has been widely adopted by the developmental cognitive neuroscience community, but the application of machine learning (ML) in this domain lags behind adult EEG studies. Applying ML to infant data is particularly challenging due to the low number of trials, low signal-to-noise ratio, high inter-subject variability, and high inter-trial variability. Here, we provide a step-by-step tutorial on how to apply ML to classify cognitive states in infants. We describe the type of brain attributes that are widely used for EEG classification and also introduce a Riemannian geometry based approach for deriving connectivity estimates that account for inter-trial and inter-subject variability. We present pipelines for learning classifiers using trials from a single infant and from multiple infants, and demonstrate the application of these pipelines on a standard infant EEG dataset of forty 12-month-old infants collected under an auditory oddball paradigm. While we classify perceptual states induced by frequent versus rare stimuli, the presented pipelines can be easily adapted for other experimental designs and stimuli using the associated code that we have made publicly available.
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spelling pubmed-89434182022-03-25 A practical guide to applying machine learning to infant EEG data Ng, Bernard Reh, Rebecca K. Mostafavi, Sara Dev Cogn Neurosci Original Research Electroencephalography (EEG) has been widely adopted by the developmental cognitive neuroscience community, but the application of machine learning (ML) in this domain lags behind adult EEG studies. Applying ML to infant data is particularly challenging due to the low number of trials, low signal-to-noise ratio, high inter-subject variability, and high inter-trial variability. Here, we provide a step-by-step tutorial on how to apply ML to classify cognitive states in infants. We describe the type of brain attributes that are widely used for EEG classification and also introduce a Riemannian geometry based approach for deriving connectivity estimates that account for inter-trial and inter-subject variability. We present pipelines for learning classifiers using trials from a single infant and from multiple infants, and demonstrate the application of these pipelines on a standard infant EEG dataset of forty 12-month-old infants collected under an auditory oddball paradigm. While we classify perceptual states induced by frequent versus rare stimuli, the presented pipelines can be easily adapted for other experimental designs and stimuli using the associated code that we have made publicly available. Elsevier 2022-03-14 /pmc/articles/PMC8943418/ /pubmed/35334336 http://dx.doi.org/10.1016/j.dcn.2022.101096 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Research
Ng, Bernard
Reh, Rebecca K.
Mostafavi, Sara
A practical guide to applying machine learning to infant EEG data
title A practical guide to applying machine learning to infant EEG data
title_full A practical guide to applying machine learning to infant EEG data
title_fullStr A practical guide to applying machine learning to infant EEG data
title_full_unstemmed A practical guide to applying machine learning to infant EEG data
title_short A practical guide to applying machine learning to infant EEG data
title_sort practical guide to applying machine learning to infant eeg data
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8943418/
https://www.ncbi.nlm.nih.gov/pubmed/35334336
http://dx.doi.org/10.1016/j.dcn.2022.101096
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