Cargando…
A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea
Archaea, once thought to only live in extreme environments, are present in many ecosystems, including the human microbiome, and they play important roles ranging from nutrient cycling to bioremediation. Yet this domain is often overlooked in microbiology classes and rarely included in laboratory exe...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Microbiology
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8943627/ https://www.ncbi.nlm.nih.gov/pubmed/35340443 http://dx.doi.org/10.1128/jmbe.00234-21 |
_version_ | 1784673560417009664 |
---|---|
author | Schiller, Heather Young, Criston Schulze, Stefan Tripepi, Manuela Pohlschroder, Mechthild |
author_facet | Schiller, Heather Young, Criston Schulze, Stefan Tripepi, Manuela Pohlschroder, Mechthild |
author_sort | Schiller, Heather |
collection | PubMed |
description | Archaea, once thought to only live in extreme environments, are present in many ecosystems, including the human microbiome, and they play important roles ranging from nutrient cycling to bioremediation. Yet this domain is often overlooked in microbiology classes and rarely included in laboratory exercises. Excluding archaea from high school and undergraduate curricula prevents students from learning the uniqueness and importance of this domain. Here, we have modified a familiar and popular microbiology experiment—the Kirby-Bauer disk diffusion antibiotic susceptibility test—to include, together with the model bacterium Escherichia coli, the model archaeon Haloferax volcanii. Students will learn the differences and similarities between archaea and bacteria by using antibiotics that target, for example, the bacterial peptidoglycan cell wall or the ribosome. Furthermore, the experiment provides a platform to reiterate basic cellular biology concepts that students may have previously discussed. We have developed two versions of this experiment, one designed for an undergraduate laboratory curriculum and the second, limited to H. volcanii, that high school students can perform in their classrooms. This nonpathogenic halophile can be cultured aerobically at ambient temperature in high-salt media, preventing contamination, making the experiment low-cost and safe for use in the high school setting. |
format | Online Article Text |
id | pubmed-8943627 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Society for Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-89436272022-03-25 A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea Schiller, Heather Young, Criston Schulze, Stefan Tripepi, Manuela Pohlschroder, Mechthild J Microbiol Biol Educ Tips and Tools Archaea, once thought to only live in extreme environments, are present in many ecosystems, including the human microbiome, and they play important roles ranging from nutrient cycling to bioremediation. Yet this domain is often overlooked in microbiology classes and rarely included in laboratory exercises. Excluding archaea from high school and undergraduate curricula prevents students from learning the uniqueness and importance of this domain. Here, we have modified a familiar and popular microbiology experiment—the Kirby-Bauer disk diffusion antibiotic susceptibility test—to include, together with the model bacterium Escherichia coli, the model archaeon Haloferax volcanii. Students will learn the differences and similarities between archaea and bacteria by using antibiotics that target, for example, the bacterial peptidoglycan cell wall or the ribosome. Furthermore, the experiment provides a platform to reiterate basic cellular biology concepts that students may have previously discussed. We have developed two versions of this experiment, one designed for an undergraduate laboratory curriculum and the second, limited to H. volcanii, that high school students can perform in their classrooms. This nonpathogenic halophile can be cultured aerobically at ambient temperature in high-salt media, preventing contamination, making the experiment low-cost and safe for use in the high school setting. American Society for Microbiology 2022-01-31 /pmc/articles/PMC8943627/ /pubmed/35340443 http://dx.doi.org/10.1128/jmbe.00234-21 Text en Copyright © 2022 Schiller et al. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International license (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Tips and Tools Schiller, Heather Young, Criston Schulze, Stefan Tripepi, Manuela Pohlschroder, Mechthild A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea |
title | A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea |
title_full | A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea |
title_fullStr | A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea |
title_full_unstemmed | A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea |
title_short | A Twist to the Kirby-Bauer Disk Diffusion Susceptibility Test: an Accessible Laboratory Experiment Comparing Haloferax volcanii and Escherichia coli Antibiotic Susceptibility to Highlight the Unique Cell Biology of Archaea |
title_sort | twist to the kirby-bauer disk diffusion susceptibility test: an accessible laboratory experiment comparing haloferax volcanii and escherichia coli antibiotic susceptibility to highlight the unique cell biology of archaea |
topic | Tips and Tools |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8943627/ https://www.ncbi.nlm.nih.gov/pubmed/35340443 http://dx.doi.org/10.1128/jmbe.00234-21 |
work_keys_str_mv | AT schillerheather atwisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT youngcriston atwisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT schulzestefan atwisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT tripepimanuela atwisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT pohlschrodermechthild atwisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT schillerheather twisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT youngcriston twisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT schulzestefan twisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT tripepimanuela twisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea AT pohlschrodermechthild twisttothekirbybauerdiskdiffusionsusceptibilitytestanaccessiblelaboratoryexperimentcomparinghaloferaxvolcaniiandescherichiacoliantibioticsusceptibilitytohighlighttheuniquecellbiologyofarchaea |