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Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy

Metalloproteins are involved in key cell processes such as photosynthesis, respiration, and oxygen transport. However, the presence of transition metals (notably iron as a component of [Fe-S] clusters) often makes these proteins sensitive to oxygen-induced degradation. Consequently, their study usua...

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Autores principales: Cherrier, Mickaël V., Vernède, Xavier, Fenel, Daphna, Martin, Lydie, Arragain, Benoit, Neumann, Emmanuelle, Fontecilla-Camps, Juan C., Schoehn, Guy, Nicolet, Yvain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8945911/
https://www.ncbi.nlm.nih.gov/pubmed/35327633
http://dx.doi.org/10.3390/biom12030441
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author Cherrier, Mickaël V.
Vernède, Xavier
Fenel, Daphna
Martin, Lydie
Arragain, Benoit
Neumann, Emmanuelle
Fontecilla-Camps, Juan C.
Schoehn, Guy
Nicolet, Yvain
author_facet Cherrier, Mickaël V.
Vernède, Xavier
Fenel, Daphna
Martin, Lydie
Arragain, Benoit
Neumann, Emmanuelle
Fontecilla-Camps, Juan C.
Schoehn, Guy
Nicolet, Yvain
author_sort Cherrier, Mickaël V.
collection PubMed
description Metalloproteins are involved in key cell processes such as photosynthesis, respiration, and oxygen transport. However, the presence of transition metals (notably iron as a component of [Fe-S] clusters) often makes these proteins sensitive to oxygen-induced degradation. Consequently, their study usually requires strict anaerobic conditions. Although X-ray crystallography has been the method of choice for solving macromolecular structures for many years, recently electron microscopy has also become an increasingly powerful structure-solving technique. We have used our previous experience with cryo-crystallography to develop a method to prepare cryo-EM grids in an anaerobic chamber and have applied it to solve the structures of apoferritin and the 3 [Fe(4)S(4)]-containing pyruvate ferredoxin oxidoreductase (PFOR) at 2.40 Å and 2.90 Å resolution, respectively. The maps are of similar quality to the ones obtained under air, thereby validating our method as an improvement in the structural investigation of oxygen-sensitive metalloproteins by cryo-EM.
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spelling pubmed-89459112022-03-25 Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy Cherrier, Mickaël V. Vernède, Xavier Fenel, Daphna Martin, Lydie Arragain, Benoit Neumann, Emmanuelle Fontecilla-Camps, Juan C. Schoehn, Guy Nicolet, Yvain Biomolecules Article Metalloproteins are involved in key cell processes such as photosynthesis, respiration, and oxygen transport. However, the presence of transition metals (notably iron as a component of [Fe-S] clusters) often makes these proteins sensitive to oxygen-induced degradation. Consequently, their study usually requires strict anaerobic conditions. Although X-ray crystallography has been the method of choice for solving macromolecular structures for many years, recently electron microscopy has also become an increasingly powerful structure-solving technique. We have used our previous experience with cryo-crystallography to develop a method to prepare cryo-EM grids in an anaerobic chamber and have applied it to solve the structures of apoferritin and the 3 [Fe(4)S(4)]-containing pyruvate ferredoxin oxidoreductase (PFOR) at 2.40 Å and 2.90 Å resolution, respectively. The maps are of similar quality to the ones obtained under air, thereby validating our method as an improvement in the structural investigation of oxygen-sensitive metalloproteins by cryo-EM. MDPI 2022-03-12 /pmc/articles/PMC8945911/ /pubmed/35327633 http://dx.doi.org/10.3390/biom12030441 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Cherrier, Mickaël V.
Vernède, Xavier
Fenel, Daphna
Martin, Lydie
Arragain, Benoit
Neumann, Emmanuelle
Fontecilla-Camps, Juan C.
Schoehn, Guy
Nicolet, Yvain
Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy
title Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy
title_full Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy
title_fullStr Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy
title_full_unstemmed Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy
title_short Oxygen-Sensitive Metalloprotein Structure Determination by Cryo-Electron Microscopy
title_sort oxygen-sensitive metalloprotein structure determination by cryo-electron microscopy
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8945911/
https://www.ncbi.nlm.nih.gov/pubmed/35327633
http://dx.doi.org/10.3390/biom12030441
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