Cargando…
Applying Machine Learning with Localized Surface Plasmon Resonance Sensors to Detect SARS-CoV-2 Particles
The sudden outbreak of COVID-19 rapidly developed into a global pandemic, which caused tens of millions of infections and millions of deaths. Although SARS-CoV-2 is known to cause COVID-19, effective approaches to detect SARS-CoV-2 using a convenient, rapid, accurate, and low-cost method are lacking...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8946137/ https://www.ncbi.nlm.nih.gov/pubmed/35323443 http://dx.doi.org/10.3390/bios12030173 |
_version_ | 1784674122904633344 |
---|---|
author | Liang, Jiawei Zhang, Wei Qin, Yu Li, Ying Liu, Gang Logan Hu, Wenjun |
author_facet | Liang, Jiawei Zhang, Wei Qin, Yu Li, Ying Liu, Gang Logan Hu, Wenjun |
author_sort | Liang, Jiawei |
collection | PubMed |
description | The sudden outbreak of COVID-19 rapidly developed into a global pandemic, which caused tens of millions of infections and millions of deaths. Although SARS-CoV-2 is known to cause COVID-19, effective approaches to detect SARS-CoV-2 using a convenient, rapid, accurate, and low-cost method are lacking. To date, most of the diagnostic methods for patients with early infections are limited to the detection of viral nucleic acids via polymerase chain reaction (PCR), or antigens, using an enzyme-linked immunosorbent assay or a chemiluminescence immunoassay. This study developed a novel method that uses localized surface plasmon resonance (LSPR) sensors, optical imaging, and artificial intelligence methods to directly detect the SARS-CoV-2 virus particles without any sample preparation. The virus concentration can be qualitatively and quantitatively detected in the range of 125.28 to 10(6) vp/mL through a few steps within 12 min with a limit of detection (LOD) of 100 vp/mL. The accuracy of the SARS-CoV-2 positive or negative assessment was found to be greater than 97%, and this was demonstrated by establishing a regression machine learning model for the virus concentration prediction (R(2) > 0.95). |
format | Online Article Text |
id | pubmed-8946137 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-89461372022-03-25 Applying Machine Learning with Localized Surface Plasmon Resonance Sensors to Detect SARS-CoV-2 Particles Liang, Jiawei Zhang, Wei Qin, Yu Li, Ying Liu, Gang Logan Hu, Wenjun Biosensors (Basel) Article The sudden outbreak of COVID-19 rapidly developed into a global pandemic, which caused tens of millions of infections and millions of deaths. Although SARS-CoV-2 is known to cause COVID-19, effective approaches to detect SARS-CoV-2 using a convenient, rapid, accurate, and low-cost method are lacking. To date, most of the diagnostic methods for patients with early infections are limited to the detection of viral nucleic acids via polymerase chain reaction (PCR), or antigens, using an enzyme-linked immunosorbent assay or a chemiluminescence immunoassay. This study developed a novel method that uses localized surface plasmon resonance (LSPR) sensors, optical imaging, and artificial intelligence methods to directly detect the SARS-CoV-2 virus particles without any sample preparation. The virus concentration can be qualitatively and quantitatively detected in the range of 125.28 to 10(6) vp/mL through a few steps within 12 min with a limit of detection (LOD) of 100 vp/mL. The accuracy of the SARS-CoV-2 positive or negative assessment was found to be greater than 97%, and this was demonstrated by establishing a regression machine learning model for the virus concentration prediction (R(2) > 0.95). MDPI 2022-03-13 /pmc/articles/PMC8946137/ /pubmed/35323443 http://dx.doi.org/10.3390/bios12030173 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Liang, Jiawei Zhang, Wei Qin, Yu Li, Ying Liu, Gang Logan Hu, Wenjun Applying Machine Learning with Localized Surface Plasmon Resonance Sensors to Detect SARS-CoV-2 Particles |
title | Applying Machine Learning with Localized Surface Plasmon Resonance Sensors to Detect SARS-CoV-2 Particles |
title_full | Applying Machine Learning with Localized Surface Plasmon Resonance Sensors to Detect SARS-CoV-2 Particles |
title_fullStr | Applying Machine Learning with Localized Surface Plasmon Resonance Sensors to Detect SARS-CoV-2 Particles |
title_full_unstemmed | Applying Machine Learning with Localized Surface Plasmon Resonance Sensors to Detect SARS-CoV-2 Particles |
title_short | Applying Machine Learning with Localized Surface Plasmon Resonance Sensors to Detect SARS-CoV-2 Particles |
title_sort | applying machine learning with localized surface plasmon resonance sensors to detect sars-cov-2 particles |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8946137/ https://www.ncbi.nlm.nih.gov/pubmed/35323443 http://dx.doi.org/10.3390/bios12030173 |
work_keys_str_mv | AT liangjiawei applyingmachinelearningwithlocalizedsurfaceplasmonresonancesensorstodetectsarscov2particles AT zhangwei applyingmachinelearningwithlocalizedsurfaceplasmonresonancesensorstodetectsarscov2particles AT qinyu applyingmachinelearningwithlocalizedsurfaceplasmonresonancesensorstodetectsarscov2particles AT liying applyingmachinelearningwithlocalizedsurfaceplasmonresonancesensorstodetectsarscov2particles AT liuganglogan applyingmachinelearningwithlocalizedsurfaceplasmonresonancesensorstodetectsarscov2particles AT huwenjun applyingmachinelearningwithlocalizedsurfaceplasmonresonancesensorstodetectsarscov2particles |