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Fast, Accurate, and Robust T2 Mapping of Articular Cartilage by Neural Networks

For T2 mapping, the underlying mono-exponential signal decay is traditionally quantified by non-linear Least-Squares Estimation (LSE) curve fitting, which is prone to outliers and computationally expensive. This study aimed to validate a fully connected neural network (NN) to estimate T2 relaxation...

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Autores principales: Müller-Franzes, Gustav, Nolte, Teresa, Ciba, Malin, Schock, Justus, Khader, Firas, Prescher, Andreas, Wilms, Lena Marie, Kuhl, Christiane, Nebelung, Sven, Truhn, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8947694/
https://www.ncbi.nlm.nih.gov/pubmed/35328240
http://dx.doi.org/10.3390/diagnostics12030688
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author Müller-Franzes, Gustav
Nolte, Teresa
Ciba, Malin
Schock, Justus
Khader, Firas
Prescher, Andreas
Wilms, Lena Marie
Kuhl, Christiane
Nebelung, Sven
Truhn, Daniel
author_facet Müller-Franzes, Gustav
Nolte, Teresa
Ciba, Malin
Schock, Justus
Khader, Firas
Prescher, Andreas
Wilms, Lena Marie
Kuhl, Christiane
Nebelung, Sven
Truhn, Daniel
author_sort Müller-Franzes, Gustav
collection PubMed
description For T2 mapping, the underlying mono-exponential signal decay is traditionally quantified by non-linear Least-Squares Estimation (LSE) curve fitting, which is prone to outliers and computationally expensive. This study aimed to validate a fully connected neural network (NN) to estimate T2 relaxation times and to assess its performance versus LSE fitting methods. To this end, the NN was trained and tested in silico on a synthetic dataset of 75 million signal decays. Its quantification error was comparatively evaluated against three LSE methods, i.e., traditional methods without any modification, with an offset, and one with noise correction. Following in-situ acquisition of T2 maps in seven human cadaveric knee joint specimens at high and low signal-to-noise ratios, the NN and LSE methods were used to estimate the T2 relaxation times of the manually segmented patellofemoral cartilage. In-silico modeling at low signal-to-noise ratio indicated significantly lower quantification error for the NN (by medians of 6–33%) than for the LSE methods (p < 0.001). These results were confirmed by the in-situ measurements (medians of 10–35%). T2 quantification by the NN took only 4 s, which was faster than the LSE methods (28–43 s). In conclusion, NNs provide fast, accurate, and robust quantification of T2 relaxation times.
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spelling pubmed-89476942022-03-25 Fast, Accurate, and Robust T2 Mapping of Articular Cartilage by Neural Networks Müller-Franzes, Gustav Nolte, Teresa Ciba, Malin Schock, Justus Khader, Firas Prescher, Andreas Wilms, Lena Marie Kuhl, Christiane Nebelung, Sven Truhn, Daniel Diagnostics (Basel) Article For T2 mapping, the underlying mono-exponential signal decay is traditionally quantified by non-linear Least-Squares Estimation (LSE) curve fitting, which is prone to outliers and computationally expensive. This study aimed to validate a fully connected neural network (NN) to estimate T2 relaxation times and to assess its performance versus LSE fitting methods. To this end, the NN was trained and tested in silico on a synthetic dataset of 75 million signal decays. Its quantification error was comparatively evaluated against three LSE methods, i.e., traditional methods without any modification, with an offset, and one with noise correction. Following in-situ acquisition of T2 maps in seven human cadaveric knee joint specimens at high and low signal-to-noise ratios, the NN and LSE methods were used to estimate the T2 relaxation times of the manually segmented patellofemoral cartilage. In-silico modeling at low signal-to-noise ratio indicated significantly lower quantification error for the NN (by medians of 6–33%) than for the LSE methods (p < 0.001). These results were confirmed by the in-situ measurements (medians of 10–35%). T2 quantification by the NN took only 4 s, which was faster than the LSE methods (28–43 s). In conclusion, NNs provide fast, accurate, and robust quantification of T2 relaxation times. MDPI 2022-03-11 /pmc/articles/PMC8947694/ /pubmed/35328240 http://dx.doi.org/10.3390/diagnostics12030688 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Müller-Franzes, Gustav
Nolte, Teresa
Ciba, Malin
Schock, Justus
Khader, Firas
Prescher, Andreas
Wilms, Lena Marie
Kuhl, Christiane
Nebelung, Sven
Truhn, Daniel
Fast, Accurate, and Robust T2 Mapping of Articular Cartilage by Neural Networks
title Fast, Accurate, and Robust T2 Mapping of Articular Cartilage by Neural Networks
title_full Fast, Accurate, and Robust T2 Mapping of Articular Cartilage by Neural Networks
title_fullStr Fast, Accurate, and Robust T2 Mapping of Articular Cartilage by Neural Networks
title_full_unstemmed Fast, Accurate, and Robust T2 Mapping of Articular Cartilage by Neural Networks
title_short Fast, Accurate, and Robust T2 Mapping of Articular Cartilage by Neural Networks
title_sort fast, accurate, and robust t2 mapping of articular cartilage by neural networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8947694/
https://www.ncbi.nlm.nih.gov/pubmed/35328240
http://dx.doi.org/10.3390/diagnostics12030688
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