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Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features
Wild rocket (Diplotaxis tenuifolia, Brassicaceae) is a baby-leaf vegetable crop of high economic interest, used in ready-to-eat minimally processed salads, with an appreciated taste and nutraceutical features. Disease management is key to achieving the sustainability of the entire production chain i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8948195/ https://www.ncbi.nlm.nih.gov/pubmed/35332172 http://dx.doi.org/10.1038/s41598-022-08969-5 |
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author | Galieni, Angelica Nicastro, Nicola Pentangelo, Alfonso Platani, Cristiano Cardi, Teodoro Pane, Catello |
author_facet | Galieni, Angelica Nicastro, Nicola Pentangelo, Alfonso Platani, Cristiano Cardi, Teodoro Pane, Catello |
author_sort | Galieni, Angelica |
collection | PubMed |
description | Wild rocket (Diplotaxis tenuifolia, Brassicaceae) is a baby-leaf vegetable crop of high economic interest, used in ready-to-eat minimally processed salads, with an appreciated taste and nutraceutical features. Disease management is key to achieving the sustainability of the entire production chain in intensive systems, where synthetic fungicides are limited or not permitted. In this context, soil-borne pathologies, much feared by growers, are becoming a real emergency. Digital screening of green beds can be implemented in order to optimize the use of sustainable means. The current study used a high-resolution hyperspectral array (spectroscopy at 350–2500 nm) to attempt to follow the progression of symptoms of Rhizoctonia, Sclerotinia, and Sclerotium disease across four different severity levels. A Random Forest machine learning model reduced dimensions of the training big dataset allowing to compute de novo vegetation indices specifically informative about canopy decay caused by all basal pathogenic attacks. Their transferability was also tested on the canopy dataset, which was useful for assessing the health status of wild rocket plants. Indeed, the progression of symptoms associated with soil-borne pathogens is closely related to the reduction of leaf absorbance of the canopy in certain ranges of visible and shortwave infrared spectral regions sensitive to reduction of chlorophyll and other pigments as well as to modifications of water content and turgor. |
format | Online Article Text |
id | pubmed-8948195 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-89481952022-03-28 Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features Galieni, Angelica Nicastro, Nicola Pentangelo, Alfonso Platani, Cristiano Cardi, Teodoro Pane, Catello Sci Rep Article Wild rocket (Diplotaxis tenuifolia, Brassicaceae) is a baby-leaf vegetable crop of high economic interest, used in ready-to-eat minimally processed salads, with an appreciated taste and nutraceutical features. Disease management is key to achieving the sustainability of the entire production chain in intensive systems, where synthetic fungicides are limited or not permitted. In this context, soil-borne pathologies, much feared by growers, are becoming a real emergency. Digital screening of green beds can be implemented in order to optimize the use of sustainable means. The current study used a high-resolution hyperspectral array (spectroscopy at 350–2500 nm) to attempt to follow the progression of symptoms of Rhizoctonia, Sclerotinia, and Sclerotium disease across four different severity levels. A Random Forest machine learning model reduced dimensions of the training big dataset allowing to compute de novo vegetation indices specifically informative about canopy decay caused by all basal pathogenic attacks. Their transferability was also tested on the canopy dataset, which was useful for assessing the health status of wild rocket plants. Indeed, the progression of symptoms associated with soil-borne pathogens is closely related to the reduction of leaf absorbance of the canopy in certain ranges of visible and shortwave infrared spectral regions sensitive to reduction of chlorophyll and other pigments as well as to modifications of water content and turgor. Nature Publishing Group UK 2022-03-24 /pmc/articles/PMC8948195/ /pubmed/35332172 http://dx.doi.org/10.1038/s41598-022-08969-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Galieni, Angelica Nicastro, Nicola Pentangelo, Alfonso Platani, Cristiano Cardi, Teodoro Pane, Catello Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features |
title | Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features |
title_full | Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features |
title_fullStr | Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features |
title_full_unstemmed | Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features |
title_short | Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features |
title_sort | surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8948195/ https://www.ncbi.nlm.nih.gov/pubmed/35332172 http://dx.doi.org/10.1038/s41598-022-08969-5 |
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