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Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea

The omicron variant (B.1.1.529) of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was the predominant variant in South Korea from late January 2022. In this study, we aimed to report the early estimates of the serial interval distribution and reproduction number to quantify the transmi...

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Autores principales: Kim, Dasom, Ali, Sheikh Taslim, Kim, Sungchan, Jo, Jisoo, Lim, Jun-Sik, Lee, Sunmi, Ryu, Sukhyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8948735/
https://www.ncbi.nlm.nih.gov/pubmed/35336939
http://dx.doi.org/10.3390/v14030533
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author Kim, Dasom
Ali, Sheikh Taslim
Kim, Sungchan
Jo, Jisoo
Lim, Jun-Sik
Lee, Sunmi
Ryu, Sukhyun
author_facet Kim, Dasom
Ali, Sheikh Taslim
Kim, Sungchan
Jo, Jisoo
Lim, Jun-Sik
Lee, Sunmi
Ryu, Sukhyun
author_sort Kim, Dasom
collection PubMed
description The omicron variant (B.1.1.529) of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was the predominant variant in South Korea from late January 2022. In this study, we aimed to report the early estimates of the serial interval distribution and reproduction number to quantify the transmissibility of the omicron variant in South Korea between 25 November 2021 and 31 December 2021. We analyzed 427 local omicron cases and reconstructed 73 transmission pairs. We used a maximum likelihood estimation to assess serial interval distribution from transmission pair data and reproduction numbers from 74 local cases in the first local outbreak. We estimated that the mean serial interval was 3.78 (standard deviation, 0.76) days, which was significantly shorter in child infectors (3.0 days) compared to adult infectors (5.0 days) (p < 0.01). We estimated the mean reproduction number was 1.72 (95% CrI, 1.60–1.85) for the omicron variant during the first local outbreak. Strict adherence to public health measures, particularly in children, should be in place to reduce the transmission risk of the highly transmissible omicron variant in the community.
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spelling pubmed-89487352022-03-26 Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea Kim, Dasom Ali, Sheikh Taslim Kim, Sungchan Jo, Jisoo Lim, Jun-Sik Lee, Sunmi Ryu, Sukhyun Viruses Article The omicron variant (B.1.1.529) of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was the predominant variant in South Korea from late January 2022. In this study, we aimed to report the early estimates of the serial interval distribution and reproduction number to quantify the transmissibility of the omicron variant in South Korea between 25 November 2021 and 31 December 2021. We analyzed 427 local omicron cases and reconstructed 73 transmission pairs. We used a maximum likelihood estimation to assess serial interval distribution from transmission pair data and reproduction numbers from 74 local cases in the first local outbreak. We estimated that the mean serial interval was 3.78 (standard deviation, 0.76) days, which was significantly shorter in child infectors (3.0 days) compared to adult infectors (5.0 days) (p < 0.01). We estimated the mean reproduction number was 1.72 (95% CrI, 1.60–1.85) for the omicron variant during the first local outbreak. Strict adherence to public health measures, particularly in children, should be in place to reduce the transmission risk of the highly transmissible omicron variant in the community. MDPI 2022-03-04 /pmc/articles/PMC8948735/ /pubmed/35336939 http://dx.doi.org/10.3390/v14030533 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kim, Dasom
Ali, Sheikh Taslim
Kim, Sungchan
Jo, Jisoo
Lim, Jun-Sik
Lee, Sunmi
Ryu, Sukhyun
Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea
title Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea
title_full Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea
title_fullStr Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea
title_full_unstemmed Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea
title_short Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea
title_sort estimation of serial interval and reproduction number to quantify the transmissibility of sars-cov-2 omicron variant in south korea
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8948735/
https://www.ncbi.nlm.nih.gov/pubmed/35336939
http://dx.doi.org/10.3390/v14030533
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