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Genome-Wide Identification and Characterization of NAC Family in Hibiscus hamabo Sieb. et Zucc. under Various Abiotic Stresses

NAC transcription factor is one of the largest plant gene families, participating in the regulation of plant biological and abiotic stresses. In this study, 182 NAC proteins (HhNACs) were identified based on genomic datasets of Hibiscus hamabo Sieb. et Zucc (H. hamabo). These proteins were divided i...

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Autores principales: Wang, Zhiquan, Ni, Longjie, Liu, Dina, Fu, Zekai, Hua, Jianfeng, Lu, Zhiguo, Liu, Liangqin, Yin, Yunlong, Li, Huogen, Gu, Chunsun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8949087/
https://www.ncbi.nlm.nih.gov/pubmed/35328474
http://dx.doi.org/10.3390/ijms23063055
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author Wang, Zhiquan
Ni, Longjie
Liu, Dina
Fu, Zekai
Hua, Jianfeng
Lu, Zhiguo
Liu, Liangqin
Yin, Yunlong
Li, Huogen
Gu, Chunsun
author_facet Wang, Zhiquan
Ni, Longjie
Liu, Dina
Fu, Zekai
Hua, Jianfeng
Lu, Zhiguo
Liu, Liangqin
Yin, Yunlong
Li, Huogen
Gu, Chunsun
author_sort Wang, Zhiquan
collection PubMed
description NAC transcription factor is one of the largest plant gene families, participating in the regulation of plant biological and abiotic stresses. In this study, 182 NAC proteins (HhNACs) were identified based on genomic datasets of Hibiscus hamabo Sieb. et Zucc (H. hamabo). These proteins were divided into 19 subfamilies based on their phylogenetic relationship, motif pattern, and gene structure analysis. Expression analysis with RNA-seq revealed that most HhNACs were expressed in response to drought and salt stress. Research of quantitative real-time PCR analysis of nine selected HhNACs supported the transcriptome data’s dependability and suggested that HhNAC54 was significantly upregulated under multiple abiotic stresses. Overexpression of HhNAC54 in Arabidopsis thaliana (A. thaliana) significantly increased its tolerance to salt. This study provides a basis for a comprehensive analysis of NAC transcription factor and insight into the abiotic stress response mechanism in H. hamabo.
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spelling pubmed-89490872022-03-26 Genome-Wide Identification and Characterization of NAC Family in Hibiscus hamabo Sieb. et Zucc. under Various Abiotic Stresses Wang, Zhiquan Ni, Longjie Liu, Dina Fu, Zekai Hua, Jianfeng Lu, Zhiguo Liu, Liangqin Yin, Yunlong Li, Huogen Gu, Chunsun Int J Mol Sci Article NAC transcription factor is one of the largest plant gene families, participating in the regulation of plant biological and abiotic stresses. In this study, 182 NAC proteins (HhNACs) were identified based on genomic datasets of Hibiscus hamabo Sieb. et Zucc (H. hamabo). These proteins were divided into 19 subfamilies based on their phylogenetic relationship, motif pattern, and gene structure analysis. Expression analysis with RNA-seq revealed that most HhNACs were expressed in response to drought and salt stress. Research of quantitative real-time PCR analysis of nine selected HhNACs supported the transcriptome data’s dependability and suggested that HhNAC54 was significantly upregulated under multiple abiotic stresses. Overexpression of HhNAC54 in Arabidopsis thaliana (A. thaliana) significantly increased its tolerance to salt. This study provides a basis for a comprehensive analysis of NAC transcription factor and insight into the abiotic stress response mechanism in H. hamabo. MDPI 2022-03-11 /pmc/articles/PMC8949087/ /pubmed/35328474 http://dx.doi.org/10.3390/ijms23063055 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Zhiquan
Ni, Longjie
Liu, Dina
Fu, Zekai
Hua, Jianfeng
Lu, Zhiguo
Liu, Liangqin
Yin, Yunlong
Li, Huogen
Gu, Chunsun
Genome-Wide Identification and Characterization of NAC Family in Hibiscus hamabo Sieb. et Zucc. under Various Abiotic Stresses
title Genome-Wide Identification and Characterization of NAC Family in Hibiscus hamabo Sieb. et Zucc. under Various Abiotic Stresses
title_full Genome-Wide Identification and Characterization of NAC Family in Hibiscus hamabo Sieb. et Zucc. under Various Abiotic Stresses
title_fullStr Genome-Wide Identification and Characterization of NAC Family in Hibiscus hamabo Sieb. et Zucc. under Various Abiotic Stresses
title_full_unstemmed Genome-Wide Identification and Characterization of NAC Family in Hibiscus hamabo Sieb. et Zucc. under Various Abiotic Stresses
title_short Genome-Wide Identification and Characterization of NAC Family in Hibiscus hamabo Sieb. et Zucc. under Various Abiotic Stresses
title_sort genome-wide identification and characterization of nac family in hibiscus hamabo sieb. et zucc. under various abiotic stresses
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8949087/
https://www.ncbi.nlm.nih.gov/pubmed/35328474
http://dx.doi.org/10.3390/ijms23063055
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