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Automated Diagnosis of Optical Coherence Tomography Angiography (OCTA) Based on Machine Learning Techniques

Diabetic retinopathy (DR) refers to the ophthalmological complications of diabetes mellitus. It is primarily a disease of the retinal vasculature that can lead to vision loss. Optical coherence tomography angiography (OCTA) demonstrates the ability to detect the changes in the retinal vascular syste...

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Autores principales: Yasser, Ibrahim, Khalifa, Fahmi, Abdeltawab, Hisham, Ghazal, Mohammed, Sandhu, Harpal Singh, El-Baz, Ayman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8952189/
https://www.ncbi.nlm.nih.gov/pubmed/35336513
http://dx.doi.org/10.3390/s22062342
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author Yasser, Ibrahim
Khalifa, Fahmi
Abdeltawab, Hisham
Ghazal, Mohammed
Sandhu, Harpal Singh
El-Baz, Ayman
author_facet Yasser, Ibrahim
Khalifa, Fahmi
Abdeltawab, Hisham
Ghazal, Mohammed
Sandhu, Harpal Singh
El-Baz, Ayman
author_sort Yasser, Ibrahim
collection PubMed
description Diabetic retinopathy (DR) refers to the ophthalmological complications of diabetes mellitus. It is primarily a disease of the retinal vasculature that can lead to vision loss. Optical coherence tomography angiography (OCTA) demonstrates the ability to detect the changes in the retinal vascular system, which can help in the early detection of DR. In this paper, we describe a novel framework that can detect DR from OCTA based on capturing the appearance and morphological markers of the retinal vascular system. This new framework consists of the following main steps: (1) extracting retinal vascular system from OCTA images based on using joint Markov-Gibbs Random Field (MGRF) model to model the appearance of OCTA images and (2) estimating the distance map inside the extracted vascular system to be used as imaging markers that describe the morphology of the retinal vascular (RV) system. The OCTA images, extracted vascular system, and the RV-estimated distance map is then composed into a three-dimensional matrix to be used as an input to a convolutional neural network (CNN). The main motivation for using this data representation is that it combines the low-level data as well as high-level processed data to allow the CNN to capture significant features to increase its ability to distinguish DR from the normal retina. This has been applied on multi-scale levels to include the original full dimension images as well as sub-images extracted from the original OCTA images. The proposed approach was tested on in-vivo data using about 91 patients, which were qualitatively graded by retinal experts. In addition, it was quantitatively validated using datasets based on three metrics: sensitivity, specificity, and overall accuracy. Results showed the capability of the proposed approach, outperforming the current deep learning as well as features-based detecting DR approaches.
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spelling pubmed-89521892022-03-26 Automated Diagnosis of Optical Coherence Tomography Angiography (OCTA) Based on Machine Learning Techniques Yasser, Ibrahim Khalifa, Fahmi Abdeltawab, Hisham Ghazal, Mohammed Sandhu, Harpal Singh El-Baz, Ayman Sensors (Basel) Article Diabetic retinopathy (DR) refers to the ophthalmological complications of diabetes mellitus. It is primarily a disease of the retinal vasculature that can lead to vision loss. Optical coherence tomography angiography (OCTA) demonstrates the ability to detect the changes in the retinal vascular system, which can help in the early detection of DR. In this paper, we describe a novel framework that can detect DR from OCTA based on capturing the appearance and morphological markers of the retinal vascular system. This new framework consists of the following main steps: (1) extracting retinal vascular system from OCTA images based on using joint Markov-Gibbs Random Field (MGRF) model to model the appearance of OCTA images and (2) estimating the distance map inside the extracted vascular system to be used as imaging markers that describe the morphology of the retinal vascular (RV) system. The OCTA images, extracted vascular system, and the RV-estimated distance map is then composed into a three-dimensional matrix to be used as an input to a convolutional neural network (CNN). The main motivation for using this data representation is that it combines the low-level data as well as high-level processed data to allow the CNN to capture significant features to increase its ability to distinguish DR from the normal retina. This has been applied on multi-scale levels to include the original full dimension images as well as sub-images extracted from the original OCTA images. The proposed approach was tested on in-vivo data using about 91 patients, which were qualitatively graded by retinal experts. In addition, it was quantitatively validated using datasets based on three metrics: sensitivity, specificity, and overall accuracy. Results showed the capability of the proposed approach, outperforming the current deep learning as well as features-based detecting DR approaches. MDPI 2022-03-18 /pmc/articles/PMC8952189/ /pubmed/35336513 http://dx.doi.org/10.3390/s22062342 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yasser, Ibrahim
Khalifa, Fahmi
Abdeltawab, Hisham
Ghazal, Mohammed
Sandhu, Harpal Singh
El-Baz, Ayman
Automated Diagnosis of Optical Coherence Tomography Angiography (OCTA) Based on Machine Learning Techniques
title Automated Diagnosis of Optical Coherence Tomography Angiography (OCTA) Based on Machine Learning Techniques
title_full Automated Diagnosis of Optical Coherence Tomography Angiography (OCTA) Based on Machine Learning Techniques
title_fullStr Automated Diagnosis of Optical Coherence Tomography Angiography (OCTA) Based on Machine Learning Techniques
title_full_unstemmed Automated Diagnosis of Optical Coherence Tomography Angiography (OCTA) Based on Machine Learning Techniques
title_short Automated Diagnosis of Optical Coherence Tomography Angiography (OCTA) Based on Machine Learning Techniques
title_sort automated diagnosis of optical coherence tomography angiography (octa) based on machine learning techniques
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8952189/
https://www.ncbi.nlm.nih.gov/pubmed/35336513
http://dx.doi.org/10.3390/s22062342
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