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Data-informed reparameterization of modified RNA and the effect of explicit water models: application to pseudouridine and derivatives
Pseudouridine is one of the most abundant post-transcriptional modifications in RNA. We have previously shown that the FF99-derived parameters for pseudouridine and some of its naturally occurring derivatives in the AMBER distribution either alone or in combination with the revised γ torsion paramet...
Autores principales: | Dutta, Nivedita, Deb, Indrajit, Sarzynska, Joanna, Lahiri, Ansuman |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8956458/ https://www.ncbi.nlm.nih.gov/pubmed/35338419 http://dx.doi.org/10.1007/s10822-022-00447-4 |
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