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TeachMe: a web-based teaching system for annotating abdominal lymph nodes

The detection and characterization of lymph nodes through interpreting abdominal medical images are significant for diagnosing and treating colorectal cancer recurrence. However, interpreting abdominal medical images manually is labor-intensive and time-consuming. The related radiology education has...

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Autores principales: Chen, Shuaihua, Huang, Hao, Yang, Xuyang, Wang, Han, Wei, Mingtian, Zhang, Haixian, Wang, Ziqiang, Yi, Zhang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8956716/
https://www.ncbi.nlm.nih.gov/pubmed/35338176
http://dx.doi.org/10.1038/s41598-022-08958-8
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author Chen, Shuaihua
Huang, Hao
Yang, Xuyang
Wang, Han
Wei, Mingtian
Zhang, Haixian
Wang, Ziqiang
Yi, Zhang
author_facet Chen, Shuaihua
Huang, Hao
Yang, Xuyang
Wang, Han
Wei, Mingtian
Zhang, Haixian
Wang, Ziqiang
Yi, Zhang
author_sort Chen, Shuaihua
collection PubMed
description The detection and characterization of lymph nodes through interpreting abdominal medical images are significant for diagnosing and treating colorectal cancer recurrence. However, interpreting abdominal medical images manually is labor-intensive and time-consuming. The related radiology education has many limitations as well. In this context, we seek to build an extensive collection of abdominal medical images with ground truth labels for lymph nodes recognition research and help junior doctors to train their interpretation skills. Therefore, we develop TeachMe, which is a web-based teaching system for annotating abdominal lymph nodes. The system has a three-level annotation-review workflow to construct an expert database of abdominal lymph nodes and a feedback mechanism helping junior doctors to learn the tricks of interpreting abdominal medical images. TeachMe’s functionalities make itself stand out against other platforms. To validate these functionalities, we invite a medical team from Gastrointestinal Surgery Center, West China Hospital, to participate in the data collection workflow and experience the feedback mechanism. With the help of TeachMe, an expert dataset of abdominal lymph nodes has been created and an automated detection model for abdominal lymph nodes with incredible performances has been proposed. Moreover, through three rounds of practicing via TeachMe, our junior doctors’ interpretation skills have been improved.
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spelling pubmed-89567162022-03-28 TeachMe: a web-based teaching system for annotating abdominal lymph nodes Chen, Shuaihua Huang, Hao Yang, Xuyang Wang, Han Wei, Mingtian Zhang, Haixian Wang, Ziqiang Yi, Zhang Sci Rep Article The detection and characterization of lymph nodes through interpreting abdominal medical images are significant for diagnosing and treating colorectal cancer recurrence. However, interpreting abdominal medical images manually is labor-intensive and time-consuming. The related radiology education has many limitations as well. In this context, we seek to build an extensive collection of abdominal medical images with ground truth labels for lymph nodes recognition research and help junior doctors to train their interpretation skills. Therefore, we develop TeachMe, which is a web-based teaching system for annotating abdominal lymph nodes. The system has a three-level annotation-review workflow to construct an expert database of abdominal lymph nodes and a feedback mechanism helping junior doctors to learn the tricks of interpreting abdominal medical images. TeachMe’s functionalities make itself stand out against other platforms. To validate these functionalities, we invite a medical team from Gastrointestinal Surgery Center, West China Hospital, to participate in the data collection workflow and experience the feedback mechanism. With the help of TeachMe, an expert dataset of abdominal lymph nodes has been created and an automated detection model for abdominal lymph nodes with incredible performances has been proposed. Moreover, through three rounds of practicing via TeachMe, our junior doctors’ interpretation skills have been improved. Nature Publishing Group UK 2022-03-25 /pmc/articles/PMC8956716/ /pubmed/35338176 http://dx.doi.org/10.1038/s41598-022-08958-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Chen, Shuaihua
Huang, Hao
Yang, Xuyang
Wang, Han
Wei, Mingtian
Zhang, Haixian
Wang, Ziqiang
Yi, Zhang
TeachMe: a web-based teaching system for annotating abdominal lymph nodes
title TeachMe: a web-based teaching system for annotating abdominal lymph nodes
title_full TeachMe: a web-based teaching system for annotating abdominal lymph nodes
title_fullStr TeachMe: a web-based teaching system for annotating abdominal lymph nodes
title_full_unstemmed TeachMe: a web-based teaching system for annotating abdominal lymph nodes
title_short TeachMe: a web-based teaching system for annotating abdominal lymph nodes
title_sort teachme: a web-based teaching system for annotating abdominal lymph nodes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8956716/
https://www.ncbi.nlm.nih.gov/pubmed/35338176
http://dx.doi.org/10.1038/s41598-022-08958-8
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