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Cox model and decision trees: an application to breast cancer data

OBJECTIVE. To evaluate, using semiparametric methodologies of survival analysis, the relationship between covariates and time to death of patients with breast cancer, as well as the determination discriminatory power in the conditional inference tree of patients who had cancer. METHODS. A retrospect...

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Autores principales: Pereira, Lucas Cardoso, da Silva, Sóstenes Jerônimo, Fidelis, Cleanderson Romualdo, Brito, Alisson de Lima, Xavier Júnior, Silvio Fernando Alves, Andrade, Lorena Sofia dos Santos, de Oliveira, Milena Edite Casé, de Oliveira, Tiago Almeida
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Organización Panamericana de la Salud 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8956854/
https://www.ncbi.nlm.nih.gov/pubmed/35350458
http://dx.doi.org/10.26633/RPSP.2022.17
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author Pereira, Lucas Cardoso
da Silva, Sóstenes Jerônimo
Fidelis, Cleanderson Romualdo
Brito, Alisson de Lima
Xavier Júnior, Silvio Fernando Alves
Andrade, Lorena Sofia dos Santos
de Oliveira, Milena Edite Casé
de Oliveira, Tiago Almeida
author_facet Pereira, Lucas Cardoso
da Silva, Sóstenes Jerônimo
Fidelis, Cleanderson Romualdo
Brito, Alisson de Lima
Xavier Júnior, Silvio Fernando Alves
Andrade, Lorena Sofia dos Santos
de Oliveira, Milena Edite Casé
de Oliveira, Tiago Almeida
author_sort Pereira, Lucas Cardoso
collection PubMed
description OBJECTIVE. To evaluate, using semiparametric methodologies of survival analysis, the relationship between covariates and time to death of patients with breast cancer, as well as the determination discriminatory power in the conditional inference tree of patients who had cancer. METHODS. A retrospective cohort study was conducted using data collected from medical records of women who had breast cancer and underwent treatment between 2005 and 2015 at the Hospital da Fundação de Assistencial da Paraíba in Campina Grande, State of Paraiba, Brazil. Survival curves were estimated using the Kaplan–Meier method, Cox regression, and conditional decision tree. RESULTS. Women with triple-negative molecular subtypes had a shorter survival time compared to women with positive hormone receptors. The addition of hormone therapy reduced the risk of a patient dying by 5.5%, and the risk of a HER2-positive patient dying was 34.5% lower compared to those who were negative for this gene. Patients undergoing hormone therapy had a median survival time of 4 753 days. CONCLUSIONS. This paper shows a favorable scenario for the use of immunotherapy for patients with HER2 overexpression. Further studies could assess the effectiveness of immunotherapy in patients with other conditions, to favor the prognosis and better quality of life for the patient.
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spelling pubmed-89568542022-03-28 Cox model and decision trees: an application to breast cancer data Pereira, Lucas Cardoso da Silva, Sóstenes Jerônimo Fidelis, Cleanderson Romualdo Brito, Alisson de Lima Xavier Júnior, Silvio Fernando Alves Andrade, Lorena Sofia dos Santos de Oliveira, Milena Edite Casé de Oliveira, Tiago Almeida Rev Panam Salud Publica Original Research OBJECTIVE. To evaluate, using semiparametric methodologies of survival analysis, the relationship between covariates and time to death of patients with breast cancer, as well as the determination discriminatory power in the conditional inference tree of patients who had cancer. METHODS. A retrospective cohort study was conducted using data collected from medical records of women who had breast cancer and underwent treatment between 2005 and 2015 at the Hospital da Fundação de Assistencial da Paraíba in Campina Grande, State of Paraiba, Brazil. Survival curves were estimated using the Kaplan–Meier method, Cox regression, and conditional decision tree. RESULTS. Women with triple-negative molecular subtypes had a shorter survival time compared to women with positive hormone receptors. The addition of hormone therapy reduced the risk of a patient dying by 5.5%, and the risk of a HER2-positive patient dying was 34.5% lower compared to those who were negative for this gene. Patients undergoing hormone therapy had a median survival time of 4 753 days. CONCLUSIONS. This paper shows a favorable scenario for the use of immunotherapy for patients with HER2 overexpression. Further studies could assess the effectiveness of immunotherapy in patients with other conditions, to favor the prognosis and better quality of life for the patient. Organización Panamericana de la Salud 2022-03-23 /pmc/articles/PMC8956854/ /pubmed/35350458 http://dx.doi.org/10.26633/RPSP.2022.17 Text en https://creativecommons.org/licenses/by-nc-nd/3.0/us/This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 IGO License, which permits use, distribution, and reproduction in any medium, provided the original work is properly cited. No modifications or commercial use of this article are permitted. In any reproduction of this article there should not be any suggestion that PAHO or this article endorse any specific organization or products. The use of the PAHO logo is not permitted. This notice should be preserved along with the article’s original URL. Open access logo and text by PLoS, under the Creative Commons Attribution-Share Alike 3.0 Unported license.
spellingShingle Original Research
Pereira, Lucas Cardoso
da Silva, Sóstenes Jerônimo
Fidelis, Cleanderson Romualdo
Brito, Alisson de Lima
Xavier Júnior, Silvio Fernando Alves
Andrade, Lorena Sofia dos Santos
de Oliveira, Milena Edite Casé
de Oliveira, Tiago Almeida
Cox model and decision trees: an application to breast cancer data
title Cox model and decision trees: an application to breast cancer data
title_full Cox model and decision trees: an application to breast cancer data
title_fullStr Cox model and decision trees: an application to breast cancer data
title_full_unstemmed Cox model and decision trees: an application to breast cancer data
title_short Cox model and decision trees: an application to breast cancer data
title_sort cox model and decision trees: an application to breast cancer data
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8956854/
https://www.ncbi.nlm.nih.gov/pubmed/35350458
http://dx.doi.org/10.26633/RPSP.2022.17
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