Cargando…

Phylogenetic-based inference reveals distinct transmission dynamics of SARS-CoV-2 lineages Gamma and P.2 in Brazil

The COVID-19 epidemic in Brazil experienced two major lineage replacements until mid-2021. The first was driven by lineage P.2, in late 2020, and the second by lineage Gamma, in early 2021. To understand how these SARS-CoV-2 lineages spread in Brazil, we analyzed 11,724 genomes collected throughout...

Descripción completa

Detalles Bibliográficos
Autores principales:	Gräf, Tiago, Bello, Gonzalo, Naveca, Felipe Gomes, Gomes, Marcelo, Cardoso, Vanessa Leiko Oikawa, da Silva, Alexandre Freitas, Dezordi, Filipe Zimmer, dos Santos, Mirleide Cordeiro, Santos, Katia Correa de Oliveira, Batista, Érika Lopes Rocha, Magalhães, Alessandro Leonardo Álvares, Vinhal, Fernando, Miyajima, Fábio, Faoro, Helisson, Khouri, Ricardo, Wallau, Gabriel Luz, Delatorre, Edson, Siqueira, Marilda Mendonça, Resende, Paola Cristina
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Elsevier 2022
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8957357/ https://www.ncbi.nlm.nih.gov/pubmed/35368908 http://dx.doi.org/10.1016/j.isci.2022.104156

Ejemplares similares

Emergence and Spread of the SARS-CoV-2 Variant of Concern Delta across Different Brazilian Regions
por: Arantes, Ighor, et al.
Publicado: (2022)

Comparative epidemic expansion of SARS-CoV-2 variants Delta and Omicron in the Brazilian State of Amazonas
por: Arantes, Ighor, et al.
Publicado: (2023)

Spread of Gamma (P.1) Sub-Lineages Carrying Spike Mutations Close to the Furin Cleavage Site and Deletions in the N-Terminal Domain Drives Ongoing Transmission of SARS-CoV-2 in Amazonas, Brazil
por: Naveca, Felipe Gomes, et al.
Publicado: (2022)

Unusual SARS-CoV-2 intrahost diversity reveals lineage superinfection
por: Dezordi, Filipe Zimmer, et al.
Publicado: (2022)

In and Outs of Chuviridae Endogenous Viral Elements: Origin of a Potentially New Retrovirus and Signature of Ancient and Ongoing Arms Race in Mosquito Genomes
por: Dezordi, Filipe Zimmer, et al.
Publicado: (2020)

Systematic Review of Wolbachia Symbiont Detection in Mosquitoes: An Entangled Topic about Methodological Power and True Symbiosis
por: Inácio da Silva, Luísa Maria, et al.
Publicado: (2021)

The ongoing evolution of variants of concern and interest of SARS-CoV-2 in Brazil revealed by convergent indels in the amino (N)-terminal domain of the spike protein
por: Resende, Paola Cristina, et al.
Publicado: (2021)

Identification of a novel SARS-CoV-2 P.1 sub-lineage in Brazil provides new insights about the mechanisms of emergence of variants of concern
por: Gräf, Tiago, et al.
Publicado: (2021)

Ancient origin of Jingchuvirales derived glycoproteins integrated in arthropod genomes
por: Dezordi, Filipe Zimmer, et al.
Publicado: (2023)

A Potential SARS-CoV-2 Variant of Interest (VOI) Harboring Mutation E484K in the Spike Protein Was Identified within Lineage B.1.1.33 Circulating in Brazil
por: Resende, Paola Cristina, et al.
Publicado: (2021)

Drosophila parasitoid wasps bears a distinct DNA transposon profile
por: da Silva, Alexandre Freitas, et al.
Publicado: (2018)

SARS-CoV-2 intra-host diversity, antibody response, and disease severity after reinfection by the variant of concern Gamma in Brazil
por: Naveca, Felipe Gomes, et al.
Publicado: (2023)

Evolutionary Dynamics and Dissemination Pattern of the SARS-CoV-2 Lineage B.1.1.33 During the Early Pandemic Phase in Brazil
por: Resende, Paola Cristina, et al.
Publicado: (2021)

Origin and evolution of nonulosonic acid synthases and their relationship with bacterial pathogenicity revealed by a large-scale phylogenetic analysis
por: Vieira, Alexandre Zanatta, et al.
Publicado: (2021)

Phylogenetics applied to the human immunodeficiency virus type 1 (HIV-1): from the cross-species transmissions to the contact network inferences
por: Gräf, Tiago, et al.
Publicado: (2020)

Resensitization of Fosfomycin-Resistant Escherichia coli Using the CRISPR System
por: Walflor, Haniel Siqueira Mortagua, et al.
Publicado: (2022)

RNA-binding proteins and their role in the regulation of gene expression in Trypanosoma cruzi and Saccharomyces cerevisiae
por: Oliveira, Camila, et al.
Publicado: (2017)

An Inexpensive and Accurate Reverse Transcription-PCR–Melting Temperature Analysis Assay for Real-Time Influenza Virus B Lineage Discrimination
por: Motta, Fernando Couto, et al.
Publicado: (2019)

Resistome analysis of bloodstream infection bacterial genomes reveals a specific set of proteins involved in antibiotic resistance and drug efflux
por: Oliveira, Willian K, et al.
Publicado: (2020)

Tracking the onset date of the community spread of SARS-CoV-2 in western countries
por: Delatorre, Edson, et al.
Publicado: (2020)

Dengue Virus Serotype 4, Roraima State, Brazil
por: Acosta, Pablo Oscar Amézaga, et al.
Publicado: (2011)

Influenza A(H11N2) Virus Detection in Fecal Samples from Adélie (Pygoscelis adeliae) and Chinstrap (Pygoscelis antarcticus) Penguins, Penguin Island, Antarctica
por: Ogrzewalska, Maria, et al.
Publicado: (2022)

ViralFlow: A Versatile Automated Workflow for SARS-CoV-2 Genome Assembly, Lineage Assignment, Mutations and Intrahost Variant Detection
por: Dezordi, Filipe Zimmer, et al.
Publicado: (2022)

Clinical and epidemiological aspects of Delta and Gamma SARS-CoV-2 variant of concern from the western Brazilian Amazon
por: Sgorlon, Gabriella, et al.
Publicado: (2023)

HTT-DB: new features and updates
por: Dotto, Bruno Reis, et al.
Publicado: (2018)

TgKDAC4: A Unique Deacetylase of Toxoplasma’s Apicoplast
por: Fragoso, Mariana Sayuri Ishikawa, et al.
Publicado: (2023)

Influence of the tilt angle of Percutaneous Aortic Prosthesis on Velocity and Shear Stress Fields
por: Gomes, Bruno Alvares de Azevedo, et al.
Publicado: (2017)

Role of Efflux Pumps on Antimicrobial Resistance in Pseudomonas aeruginosa
por: Lorusso, Andre Bittencourt, et al.
Publicado: (2022)

Paracoccidioidomycosis as an opportunistic manifestation of acquired immunodeficiency syndrome
por: dos Santos, Paulo Ricardo Gomes, et al.
Publicado: (2022)

Identification of a novel alphavirus related to the encephalitis complexes circulating in southern Brazil
por: Tschá, Marcel Kruchelski, et al.
Publicado: (2019)

Genomic and phylogenetic characterisation of an imported case of SARS-CoV-2 in Amazonas State, Brazil
por: do Nascimento, Valdinete Alves, et al.
Publicado: (2020)

The CCR5Δ32 (rs333) polymorphism is not a predisposing factor for severe pandemic influenza in the Brazilian admixed population
por: Maestri, Alvino, et al.
Publicado: (2015)

Reemergence of Dengue Virus Serotype 3, Brazil, 2023
por: Naveca, Felipe Gomes, et al.
Publicado: (2023)

Genetic evolution of influenza viruses among selected countries in Latin America, 2017–2018
por: Leite, Juliana Almeida, et al.
Publicado: (2020)

Phylodynamics of the HIV-1 Epidemic in Cuba
por: Delatorre, Edson, et al.
Publicado: (2013)

Time-scale of minor HIV-1 complex circulating recombinant forms from Central and West Africa
por: Delatorre, Edson, et al.
Publicado: (2016)

SARS-CoV-2 variant N.9 identified in Rio de Janeiro, Brazil
por: Tort, Luis Fernando Lopez, et al.
Publicado: (2021)

Cross-Kingdom Extracellular Vesicles EV-RNA Communication as a Mechanism for Host–Pathogen Interaction
por: Munhoz da Rocha, Isadora Filipaki, et al.
Publicado: (2020)

Dengue in kidney transplanted patients: additions to the puzzle!
por: Delfino, Vinicius Daher Alvares, et al.
Publicado: (2022)

Molecular characterization of a new SARS-CoV-2 recombinant cluster XAG identified in Brazil
por: Silva, Thaís de Souza, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_5ifufupbhgcl4nqd4mmhgogsip