Cargando…
Target Specific Inhibition of Protein Tyrosine Kinase in Conjunction With Cancer and SARS-COV-2 by Olive Nutraceuticals
The fact that viruses cause human cancer dates back to the early 1980s. By reprogramming cellular signaling pathways, viruses encoded protein that can regulate altered control of cell cycle events. Viruses can interact with a superfamily of membrane bound protein, receptor tyrosine kinase to modulat...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959131/ https://www.ncbi.nlm.nih.gov/pubmed/35356629 http://dx.doi.org/10.3389/fphar.2021.812565 |
_version_ | 1784677082361495552 |
---|---|
author | Ghosh, Arabinda Mukerjee, Nobendu Sharma, Bhavdeep Pant, Anushree Kishore Mohanta, Yugal Jawarkar, Rahul D. Bakal, Ravindrakumar L. Terefe, Ermias Mergia Batiha, Gaber El-Saber Mostafa-Hedeab, Gomaa Aref Albezrah, Nisreen Khalid Dey, Abhijit Baishya, Debabrat |
author_facet | Ghosh, Arabinda Mukerjee, Nobendu Sharma, Bhavdeep Pant, Anushree Kishore Mohanta, Yugal Jawarkar, Rahul D. Bakal, Ravindrakumar L. Terefe, Ermias Mergia Batiha, Gaber El-Saber Mostafa-Hedeab, Gomaa Aref Albezrah, Nisreen Khalid Dey, Abhijit Baishya, Debabrat |
author_sort | Ghosh, Arabinda |
collection | PubMed |
description | The fact that viruses cause human cancer dates back to the early 1980s. By reprogramming cellular signaling pathways, viruses encoded protein that can regulate altered control of cell cycle events. Viruses can interact with a superfamily of membrane bound protein, receptor tyrosine kinase to modulate their activity in order to increase virus entrance into cells and promotion of viral replication within the host. Therefore, our study aimed at screening of inhibitors of tyrosine kinase using natural compounds from olive. Protein tyrosine kinase (PTK) is an important factor for cancer progression and can be linked to coronavirus. It is evident that over expression of Protein tyrosine kinase (PTK) enhance viral endocytosis and proliferation and the use of tyrosine kinase inhibitors reduced the period of infection period. Functional network studies were carried out using two major PTKs viz. Anaplastic lymphoma kinase (ALK) and B-lymphocytic kinase (BTK). They are associated with coronavirus in regulation of cell signaling proteins for cellular processes. We virtually screened for 161 library of natural compounds from olive found overexpressed in ALK and BTK in metastatic as well as virus host cells. We have employed both ligand and target-based approach for drug designing by high throughput screening using Multilinear regression model based QSAR and docking. The QSAR based virtual screening of 161 olive nutraceutical compounds has successfully identified certain new hit; Wedelosin, in which, the descriptor rsa (ratio of molecular surface area to the solvent accessible surface area) plays crucial role in deciding Wedelosin’s inhibitory potency. The best-docked olive nutraceuticals further investigated for the stability and effectivity of the BTK and ALK during in 150 ns molecular dynamics and simulation. Post simulation analysis and binding energy estimation in MMGBSA further revealed the intensive potential of the olive nutraceuticals in PTK inhibition. This study is therefore expected to widen the use of nutraceuticals from olive in cancer as well as SARS-CoV2 alternative therapy. |
format | Online Article Text |
id | pubmed-8959131 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89591312022-03-29 Target Specific Inhibition of Protein Tyrosine Kinase in Conjunction With Cancer and SARS-COV-2 by Olive Nutraceuticals Ghosh, Arabinda Mukerjee, Nobendu Sharma, Bhavdeep Pant, Anushree Kishore Mohanta, Yugal Jawarkar, Rahul D. Bakal, Ravindrakumar L. Terefe, Ermias Mergia Batiha, Gaber El-Saber Mostafa-Hedeab, Gomaa Aref Albezrah, Nisreen Khalid Dey, Abhijit Baishya, Debabrat Front Pharmacol Pharmacology The fact that viruses cause human cancer dates back to the early 1980s. By reprogramming cellular signaling pathways, viruses encoded protein that can regulate altered control of cell cycle events. Viruses can interact with a superfamily of membrane bound protein, receptor tyrosine kinase to modulate their activity in order to increase virus entrance into cells and promotion of viral replication within the host. Therefore, our study aimed at screening of inhibitors of tyrosine kinase using natural compounds from olive. Protein tyrosine kinase (PTK) is an important factor for cancer progression and can be linked to coronavirus. It is evident that over expression of Protein tyrosine kinase (PTK) enhance viral endocytosis and proliferation and the use of tyrosine kinase inhibitors reduced the period of infection period. Functional network studies were carried out using two major PTKs viz. Anaplastic lymphoma kinase (ALK) and B-lymphocytic kinase (BTK). They are associated with coronavirus in regulation of cell signaling proteins for cellular processes. We virtually screened for 161 library of natural compounds from olive found overexpressed in ALK and BTK in metastatic as well as virus host cells. We have employed both ligand and target-based approach for drug designing by high throughput screening using Multilinear regression model based QSAR and docking. The QSAR based virtual screening of 161 olive nutraceutical compounds has successfully identified certain new hit; Wedelosin, in which, the descriptor rsa (ratio of molecular surface area to the solvent accessible surface area) plays crucial role in deciding Wedelosin’s inhibitory potency. The best-docked olive nutraceuticals further investigated for the stability and effectivity of the BTK and ALK during in 150 ns molecular dynamics and simulation. Post simulation analysis and binding energy estimation in MMGBSA further revealed the intensive potential of the olive nutraceuticals in PTK inhibition. This study is therefore expected to widen the use of nutraceuticals from olive in cancer as well as SARS-CoV2 alternative therapy. Frontiers Media S.A. 2022-03-08 /pmc/articles/PMC8959131/ /pubmed/35356629 http://dx.doi.org/10.3389/fphar.2021.812565 Text en Copyright © 2022 Ghosh, Mukerjee, Sharma, Pant, Kishore Mohanta, Jawarkar, Bakal, Terefe, Batiha, Mostafa-Hedeab, Aref Albezrah, Dey and Baishya. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Pharmacology Ghosh, Arabinda Mukerjee, Nobendu Sharma, Bhavdeep Pant, Anushree Kishore Mohanta, Yugal Jawarkar, Rahul D. Bakal, Ravindrakumar L. Terefe, Ermias Mergia Batiha, Gaber El-Saber Mostafa-Hedeab, Gomaa Aref Albezrah, Nisreen Khalid Dey, Abhijit Baishya, Debabrat Target Specific Inhibition of Protein Tyrosine Kinase in Conjunction With Cancer and SARS-COV-2 by Olive Nutraceuticals |
title | Target Specific Inhibition of Protein Tyrosine Kinase in Conjunction With Cancer and SARS-COV-2 by Olive Nutraceuticals |
title_full | Target Specific Inhibition of Protein Tyrosine Kinase in Conjunction With Cancer and SARS-COV-2 by Olive Nutraceuticals |
title_fullStr | Target Specific Inhibition of Protein Tyrosine Kinase in Conjunction With Cancer and SARS-COV-2 by Olive Nutraceuticals |
title_full_unstemmed | Target Specific Inhibition of Protein Tyrosine Kinase in Conjunction With Cancer and SARS-COV-2 by Olive Nutraceuticals |
title_short | Target Specific Inhibition of Protein Tyrosine Kinase in Conjunction With Cancer and SARS-COV-2 by Olive Nutraceuticals |
title_sort | target specific inhibition of protein tyrosine kinase in conjunction with cancer and sars-cov-2 by olive nutraceuticals |
topic | Pharmacology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959131/ https://www.ncbi.nlm.nih.gov/pubmed/35356629 http://dx.doi.org/10.3389/fphar.2021.812565 |
work_keys_str_mv | AT ghosharabinda targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT mukerjeenobendu targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT sharmabhavdeep targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT pantanushree targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT kishoremohantayugal targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT jawarkarrahuld targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT bakalravindrakumarl targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT terefeermiasmergia targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT batihagaberelsaber targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT mostafahedeabgomaa targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT arefalbezrahnisreenkhalid targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT deyabhijit targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals AT baishyadebabrat targetspecificinhibitionofproteintyrosinekinaseinconjunctionwithcancerandsarscov2byolivenutraceuticals |