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Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions

Ribonucleic acid (RNA) and proteins play critical roles in gene expression and regulation. The relevant study increases the understanding of various life processes and contributes to the diagnosis and treatment of different diseases. RNA imaging and mapping RNA-protein interactions expand the unders...

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Autores principales: Cao, Huake, Wang, Yuechen, Zhang, Ning, Xia, Siyuan, Tian, Pengfei, Lu, Li, Du, Juan, Du, Yinan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959342/
https://www.ncbi.nlm.nih.gov/pubmed/35356276
http://dx.doi.org/10.3389/fcell.2022.866820
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author Cao, Huake
Wang, Yuechen
Zhang, Ning
Xia, Siyuan
Tian, Pengfei
Lu, Li
Du, Juan
Du, Yinan
author_facet Cao, Huake
Wang, Yuechen
Zhang, Ning
Xia, Siyuan
Tian, Pengfei
Lu, Li
Du, Juan
Du, Yinan
author_sort Cao, Huake
collection PubMed
description Ribonucleic acid (RNA) and proteins play critical roles in gene expression and regulation. The relevant study increases the understanding of various life processes and contributes to the diagnosis and treatment of different diseases. RNA imaging and mapping RNA-protein interactions expand the understanding of RNA biology. However, the existing methods have some limitations. Recently, precise RNA targeting of CRISPR-Cas13 in cells has been reported, which is considered a new promising platform for RNA imaging in living cells and recognition of RNA-protein interactions. In this review, we first described the current findings on Cas13. Furthermore, we introduced current tools of RNA real-time imaging and mapping RNA-protein interactions and highlighted the latest advances in Cas13-mediated tools. Finally, we discussed the advantages and disadvantages of Cas13-based methods, providing a set of new ideas for the optimization of Cas13-mediated methods.
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spelling pubmed-89593422022-03-29 Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions Cao, Huake Wang, Yuechen Zhang, Ning Xia, Siyuan Tian, Pengfei Lu, Li Du, Juan Du, Yinan Front Cell Dev Biol Cell and Developmental Biology Ribonucleic acid (RNA) and proteins play critical roles in gene expression and regulation. The relevant study increases the understanding of various life processes and contributes to the diagnosis and treatment of different diseases. RNA imaging and mapping RNA-protein interactions expand the understanding of RNA biology. However, the existing methods have some limitations. Recently, precise RNA targeting of CRISPR-Cas13 in cells has been reported, which is considered a new promising platform for RNA imaging in living cells and recognition of RNA-protein interactions. In this review, we first described the current findings on Cas13. Furthermore, we introduced current tools of RNA real-time imaging and mapping RNA-protein interactions and highlighted the latest advances in Cas13-mediated tools. Finally, we discussed the advantages and disadvantages of Cas13-based methods, providing a set of new ideas for the optimization of Cas13-mediated methods. Frontiers Media S.A. 2022-03-09 /pmc/articles/PMC8959342/ /pubmed/35356276 http://dx.doi.org/10.3389/fcell.2022.866820 Text en Copyright © 2022 Cao, Wang, Zhang, Xia, Tian, Lu, Du and Du. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Cao, Huake
Wang, Yuechen
Zhang, Ning
Xia, Siyuan
Tian, Pengfei
Lu, Li
Du, Juan
Du, Yinan
Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions
title Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions
title_full Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions
title_fullStr Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions
title_full_unstemmed Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions
title_short Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions
title_sort progress of crispr-cas13 mediated live-cell rna imaging and detection of rna-protein interactions
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959342/
https://www.ncbi.nlm.nih.gov/pubmed/35356276
http://dx.doi.org/10.3389/fcell.2022.866820
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