Characterization of the complete chloroplast genome of Carex myosuroides Villars, 1779 (Cyperaceae)

Carex myosuroides Villars, 1779 is a typical alpine sedge with both ecological and agricultural value. The work reported here is the first complete chloroplast genome of this species. The chloroplast genome, with a total size of 185,609 bp, consists of two inverted repeats (IRs, 38,374 bp) separated...

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Autores principales: Chen, Hong-Yan, Xia, Xiao-Fei, Pan, Zhe, Ning, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959502/
https://www.ncbi.nlm.nih.gov/pubmed/35356791
http://dx.doi.org/10.1080/23802359.2022.2053368
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author Chen, Hong-Yan
Xia, Xiao-Fei
Pan, Zhe
Ning, Yu
author_facet Chen, Hong-Yan
Xia, Xiao-Fei
Pan, Zhe
Ning, Yu
author_sort Chen, Hong-Yan
collection PubMed
description Carex myosuroides Villars, 1779 is a typical alpine sedge with both ecological and agricultural value. The work reported here is the first complete chloroplast genome of this species. The chloroplast genome, with a total size of 185,609 bp, consists of two inverted repeats (IRs, 38,374 bp) separated by a large single-copy (LSC, 99,911 bp) region, and a small single-copy (SSC, 8950 bp) region. The overall genome GC content is 34.12%. The genome contains 125 genes, consisting of 82 protein-coding genes, 35 tRNA genes, and eight rRNA genes. Phylogenetic analysis supports the taxonomic treatment of incorporating genus Kobresia to a broader circumscription of Carex. Our work could be helpful to future research on Cyperaceae.
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spelling pubmed-89595022022-03-29 Characterization of the complete chloroplast genome of Carex myosuroides Villars, 1779 (Cyperaceae) Chen, Hong-Yan Xia, Xiao-Fei Pan, Zhe Ning, Yu Mitochondrial DNA B Resour Mitogenome Announcement Carex myosuroides Villars, 1779 is a typical alpine sedge with both ecological and agricultural value. The work reported here is the first complete chloroplast genome of this species. The chloroplast genome, with a total size of 185,609 bp, consists of two inverted repeats (IRs, 38,374 bp) separated by a large single-copy (LSC, 99,911 bp) region, and a small single-copy (SSC, 8950 bp) region. The overall genome GC content is 34.12%. The genome contains 125 genes, consisting of 82 protein-coding genes, 35 tRNA genes, and eight rRNA genes. Phylogenetic analysis supports the taxonomic treatment of incorporating genus Kobresia to a broader circumscription of Carex. Our work could be helpful to future research on Cyperaceae. Taylor & Francis 2022-03-25 /pmc/articles/PMC8959502/ /pubmed/35356791 http://dx.doi.org/10.1080/23802359.2022.2053368 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chen, Hong-Yan
Xia, Xiao-Fei
Pan, Zhe
Ning, Yu
Characterization of the complete chloroplast genome of Carex myosuroides Villars, 1779 (Cyperaceae)
title Characterization of the complete chloroplast genome of Carex myosuroides Villars, 1779 (Cyperaceae)
title_full Characterization of the complete chloroplast genome of Carex myosuroides Villars, 1779 (Cyperaceae)
title_fullStr Characterization of the complete chloroplast genome of Carex myosuroides Villars, 1779 (Cyperaceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Carex myosuroides Villars, 1779 (Cyperaceae)
title_short Characterization of the complete chloroplast genome of Carex myosuroides Villars, 1779 (Cyperaceae)
title_sort characterization of the complete chloroplast genome of carex myosuroides villars, 1779 (cyperaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959502/
https://www.ncbi.nlm.nih.gov/pubmed/35356791
http://dx.doi.org/10.1080/23802359.2022.2053368
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