The complete chloroplast genome sequence of Tussilago farfara (Asteraceae)

Tussilago farfara is a member of the family Asteraceae. In this paper, we reported the complete chloroplast (cp) genome sequence of T. farfara. The results showed that T. farfara complete chloroplast genome comprises 151,325 bp, containing a largen single copy (LSC) region of 83,370 bp, a small sing...

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Autores principales: Yizhong, Duan, Lu, Ke, Zhongyu, Du, Shen, Yehua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959504/
https://www.ncbi.nlm.nih.gov/pubmed/35356793
http://dx.doi.org/10.1080/23802359.2021.2005494
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author Yizhong, Duan
Lu, Ke
Zhongyu, Du
Shen, Yehua
author_facet Yizhong, Duan
Lu, Ke
Zhongyu, Du
Shen, Yehua
author_sort Yizhong, Duan
collection PubMed
description Tussilago farfara is a member of the family Asteraceae. In this paper, we reported the complete chloroplast (cp) genome sequence of T. farfara. The results showed that T. farfara complete chloroplast genome comprises 151,325 bp, containing a largen single copy (LSC) region of 83,370 bp, a small single copy (SSC) region of 18,273 bp, and a pair of inverted repeats (IRs) region of 24,841 bp. The genome has a GC content of 37.4%. The LSC, SSC, and IR regions represent 35.5%, 30.6%, and 43.0% of the T. farfara chloroplast genome length. We annotated 132 genes, comprising 87 protein-coding genes (PCGs), eight rRNA genes, and 36 tRNA genes. A phylogenetic analysis based on 31 cpDNA genomes suggested that the T. farfara is closely related to Farfugium japonicum.
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spelling pubmed-89595042022-03-29 The complete chloroplast genome sequence of Tussilago farfara (Asteraceae) Yizhong, Duan Lu, Ke Zhongyu, Du Shen, Yehua Mitochondrial DNA B Resour Mitogenome Announcement Tussilago farfara is a member of the family Asteraceae. In this paper, we reported the complete chloroplast (cp) genome sequence of T. farfara. The results showed that T. farfara complete chloroplast genome comprises 151,325 bp, containing a largen single copy (LSC) region of 83,370 bp, a small single copy (SSC) region of 18,273 bp, and a pair of inverted repeats (IRs) region of 24,841 bp. The genome has a GC content of 37.4%. The LSC, SSC, and IR regions represent 35.5%, 30.6%, and 43.0% of the T. farfara chloroplast genome length. We annotated 132 genes, comprising 87 protein-coding genes (PCGs), eight rRNA genes, and 36 tRNA genes. A phylogenetic analysis based on 31 cpDNA genomes suggested that the T. farfara is closely related to Farfugium japonicum. Taylor & Francis 2022-03-25 /pmc/articles/PMC8959504/ /pubmed/35356793 http://dx.doi.org/10.1080/23802359.2021.2005494 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Yizhong, Duan
Lu, Ke
Zhongyu, Du
Shen, Yehua
The complete chloroplast genome sequence of Tussilago farfara (Asteraceae)
title The complete chloroplast genome sequence of Tussilago farfara (Asteraceae)
title_full The complete chloroplast genome sequence of Tussilago farfara (Asteraceae)
title_fullStr The complete chloroplast genome sequence of Tussilago farfara (Asteraceae)
title_full_unstemmed The complete chloroplast genome sequence of Tussilago farfara (Asteraceae)
title_short The complete chloroplast genome sequence of Tussilago farfara (Asteraceae)
title_sort complete chloroplast genome sequence of tussilago farfara (asteraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959504/
https://www.ncbi.nlm.nih.gov/pubmed/35356793
http://dx.doi.org/10.1080/23802359.2021.2005494
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