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Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed

Achnatherum pekinense belongs to Poaceae. The complete chloroplast genome of A. pekinense was reported in this study. The chloroplast genome was 137,837 bp in size with a canonical quadripartite structure, including two inverted repeat regions (IR) of 21,635 bp for each, a large single-copy (LSC) re...

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Autores principales: Xie, Shao-Qiu, Zhong, Bei, Tong, Bo-Qiang, Fan, Shou-Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959506/
https://www.ncbi.nlm.nih.gov/pubmed/35356792
http://dx.doi.org/10.1080/23802359.2022.2054377
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author Xie, Shao-Qiu
Zhong, Bei
Tong, Bo-Qiang
Fan, Shou-Jin
author_facet Xie, Shao-Qiu
Zhong, Bei
Tong, Bo-Qiang
Fan, Shou-Jin
author_sort Xie, Shao-Qiu
collection PubMed
description Achnatherum pekinense belongs to Poaceae. The complete chloroplast genome of A. pekinense was reported in this study. The chloroplast genome was 137,837 bp in size with a canonical quadripartite structure, including two inverted repeat regions (IR) of 21,635 bp for each, a large single-copy (LSC) region of 81,787 bp in length, and a small single-copy (SSC) region of 12,780 bp in length. The overall guanine-cytosine (GC) content of this chloroplast genome was 38.8%, and the corresponding values of the LSC, SSC, and IR regions were 36.9%, 33.1%, and 44.1%, respectively. A total of 113 unique genes were annotated in this chloroplast genome, including four rRNA genes, 31 tRNA genes, and 78 protein-coding genes. The phylogenetic analysis showed that A. pekinense was clustered with A. inebrians.
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spelling pubmed-89595062022-03-29 Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed Xie, Shao-Qiu Zhong, Bei Tong, Bo-Qiang Fan, Shou-Jin Mitochondrial DNA B Resour Mitogenome Announcement Achnatherum pekinense belongs to Poaceae. The complete chloroplast genome of A. pekinense was reported in this study. The chloroplast genome was 137,837 bp in size with a canonical quadripartite structure, including two inverted repeat regions (IR) of 21,635 bp for each, a large single-copy (LSC) region of 81,787 bp in length, and a small single-copy (SSC) region of 12,780 bp in length. The overall guanine-cytosine (GC) content of this chloroplast genome was 38.8%, and the corresponding values of the LSC, SSC, and IR regions were 36.9%, 33.1%, and 44.1%, respectively. A total of 113 unique genes were annotated in this chloroplast genome, including four rRNA genes, 31 tRNA genes, and 78 protein-coding genes. The phylogenetic analysis showed that A. pekinense was clustered with A. inebrians. Taylor & Francis 2022-03-25 /pmc/articles/PMC8959506/ /pubmed/35356792 http://dx.doi.org/10.1080/23802359.2022.2054377 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xie, Shao-Qiu
Zhong, Bei
Tong, Bo-Qiang
Fan, Shou-Jin
Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed
title Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed
title_full Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed
title_fullStr Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed
title_full_unstemmed Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed
title_short Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed
title_sort characterization of the complete chloroplast genome of achnatherum pekinense (poaceae), a widespread weed
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959506/
https://www.ncbi.nlm.nih.gov/pubmed/35356792
http://dx.doi.org/10.1080/23802359.2022.2054377
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