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Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed
Achnatherum pekinense belongs to Poaceae. The complete chloroplast genome of A. pekinense was reported in this study. The chloroplast genome was 137,837 bp in size with a canonical quadripartite structure, including two inverted repeat regions (IR) of 21,635 bp for each, a large single-copy (LSC) re...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959506/ https://www.ncbi.nlm.nih.gov/pubmed/35356792 http://dx.doi.org/10.1080/23802359.2022.2054377 |
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author | Xie, Shao-Qiu Zhong, Bei Tong, Bo-Qiang Fan, Shou-Jin |
author_facet | Xie, Shao-Qiu Zhong, Bei Tong, Bo-Qiang Fan, Shou-Jin |
author_sort | Xie, Shao-Qiu |
collection | PubMed |
description | Achnatherum pekinense belongs to Poaceae. The complete chloroplast genome of A. pekinense was reported in this study. The chloroplast genome was 137,837 bp in size with a canonical quadripartite structure, including two inverted repeat regions (IR) of 21,635 bp for each, a large single-copy (LSC) region of 81,787 bp in length, and a small single-copy (SSC) region of 12,780 bp in length. The overall guanine-cytosine (GC) content of this chloroplast genome was 38.8%, and the corresponding values of the LSC, SSC, and IR regions were 36.9%, 33.1%, and 44.1%, respectively. A total of 113 unique genes were annotated in this chloroplast genome, including four rRNA genes, 31 tRNA genes, and 78 protein-coding genes. The phylogenetic analysis showed that A. pekinense was clustered with A. inebrians. |
format | Online Article Text |
id | pubmed-8959506 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-89595062022-03-29 Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed Xie, Shao-Qiu Zhong, Bei Tong, Bo-Qiang Fan, Shou-Jin Mitochondrial DNA B Resour Mitogenome Announcement Achnatherum pekinense belongs to Poaceae. The complete chloroplast genome of A. pekinense was reported in this study. The chloroplast genome was 137,837 bp in size with a canonical quadripartite structure, including two inverted repeat regions (IR) of 21,635 bp for each, a large single-copy (LSC) region of 81,787 bp in length, and a small single-copy (SSC) region of 12,780 bp in length. The overall guanine-cytosine (GC) content of this chloroplast genome was 38.8%, and the corresponding values of the LSC, SSC, and IR regions were 36.9%, 33.1%, and 44.1%, respectively. A total of 113 unique genes were annotated in this chloroplast genome, including four rRNA genes, 31 tRNA genes, and 78 protein-coding genes. The phylogenetic analysis showed that A. pekinense was clustered with A. inebrians. Taylor & Francis 2022-03-25 /pmc/articles/PMC8959506/ /pubmed/35356792 http://dx.doi.org/10.1080/23802359.2022.2054377 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xie, Shao-Qiu Zhong, Bei Tong, Bo-Qiang Fan, Shou-Jin Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed |
title | Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed |
title_full | Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed |
title_fullStr | Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed |
title_full_unstemmed | Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed |
title_short | Characterization of the complete chloroplast genome of Achnatherum pekinense (Poaceae), a widespread weed |
title_sort | characterization of the complete chloroplast genome of achnatherum pekinense (poaceae), a widespread weed |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959506/ https://www.ncbi.nlm.nih.gov/pubmed/35356792 http://dx.doi.org/10.1080/23802359.2022.2054377 |
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