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Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia
There is a proven correlation between the severity of dementia and reduced brain volumes. Several studies have attempted to use activity data to estimate brain volume as a means of detecting reduction early; however, raw activity data are not directly interpretable and are unstructured, making them...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959707/ https://www.ncbi.nlm.nih.gov/pubmed/35356447 http://dx.doi.org/10.3389/fninf.2022.795171 |
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author | Park, Bumhee Choi, Byung Jin Lee, Heirim Jang, Jong-Hwan Roh, Hyun Woong Kim, Eun Young Hong, Chang Hyung Son, Sang Joon Yoon, Dukyong |
author_facet | Park, Bumhee Choi, Byung Jin Lee, Heirim Jang, Jong-Hwan Roh, Hyun Woong Kim, Eun Young Hong, Chang Hyung Son, Sang Joon Yoon, Dukyong |
author_sort | Park, Bumhee |
collection | PubMed |
description | There is a proven correlation between the severity of dementia and reduced brain volumes. Several studies have attempted to use activity data to estimate brain volume as a means of detecting reduction early; however, raw activity data are not directly interpretable and are unstructured, making them challenging to utilize. Furthermore, in the previous research, brain volume estimates were limited to total brain volume and the investigators were unable to detect reductions in specific regions of the brain that are typically used to characterize disease progression. We aimed to evaluate volume prediction of 116 brain regions through activity data obtained combining time-frequency domain- and unsupervised deep learning-based feature extraction methods. We developed a feature extraction model based on unsupervised deep learning using activity data from the National Health and Nutrition Examination Survey (NHANES) dataset (n = 14,482). Then, we applied the model and the time-frequency domain feature extraction method to the activity data of the Biobank Innovations for chronic Cerebrovascular disease With ALZheimer’s disease Study (BICWALZS) datasets (n = 177) to extract activity features. Brain volumes were calculated from the brain magnetic resonance imaging of the BICWALZS dataset and anatomically subdivided into 116 regions. Finally, we fitted linear regression models to estimate each regional volume of the 116 brain areas based on the extracted activity features. Regression models were statistically significant for each region, with an average correlation coefficient of 0.990 ± 0.006. In all brain regions, the correlation was > 0.964. Particularly, regions of the temporal lobe that exhibit characteristic atrophy in the early stages of Alzheimer’s disease showed the highest correlation (0.995). Through a combined deep learning-time-frequency domain feature extraction method, we could extract activity features based solely on the activity dataset, without including clinical variables. The findings of this study indicate the possibility of using activity data for the detection of neurological disorders such as Alzheimer’s disease. |
format | Online Article Text |
id | pubmed-8959707 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89597072022-03-29 Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia Park, Bumhee Choi, Byung Jin Lee, Heirim Jang, Jong-Hwan Roh, Hyun Woong Kim, Eun Young Hong, Chang Hyung Son, Sang Joon Yoon, Dukyong Front Neuroinform Neuroinformatics There is a proven correlation between the severity of dementia and reduced brain volumes. Several studies have attempted to use activity data to estimate brain volume as a means of detecting reduction early; however, raw activity data are not directly interpretable and are unstructured, making them challenging to utilize. Furthermore, in the previous research, brain volume estimates were limited to total brain volume and the investigators were unable to detect reductions in specific regions of the brain that are typically used to characterize disease progression. We aimed to evaluate volume prediction of 116 brain regions through activity data obtained combining time-frequency domain- and unsupervised deep learning-based feature extraction methods. We developed a feature extraction model based on unsupervised deep learning using activity data from the National Health and Nutrition Examination Survey (NHANES) dataset (n = 14,482). Then, we applied the model and the time-frequency domain feature extraction method to the activity data of the Biobank Innovations for chronic Cerebrovascular disease With ALZheimer’s disease Study (BICWALZS) datasets (n = 177) to extract activity features. Brain volumes were calculated from the brain magnetic resonance imaging of the BICWALZS dataset and anatomically subdivided into 116 regions. Finally, we fitted linear regression models to estimate each regional volume of the 116 brain areas based on the extracted activity features. Regression models were statistically significant for each region, with an average correlation coefficient of 0.990 ± 0.006. In all brain regions, the correlation was > 0.964. Particularly, regions of the temporal lobe that exhibit characteristic atrophy in the early stages of Alzheimer’s disease showed the highest correlation (0.995). Through a combined deep learning-time-frequency domain feature extraction method, we could extract activity features based solely on the activity dataset, without including clinical variables. The findings of this study indicate the possibility of using activity data for the detection of neurological disorders such as Alzheimer’s disease. Frontiers Media S.A. 2022-03-09 /pmc/articles/PMC8959707/ /pubmed/35356447 http://dx.doi.org/10.3389/fninf.2022.795171 Text en Copyright © 2022 Park, Choi, Lee, Jang, Roh, Kim, Hong, Son and Yoon. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroinformatics Park, Bumhee Choi, Byung Jin Lee, Heirim Jang, Jong-Hwan Roh, Hyun Woong Kim, Eun Young Hong, Chang Hyung Son, Sang Joon Yoon, Dukyong Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia |
title | Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia |
title_full | Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia |
title_fullStr | Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia |
title_full_unstemmed | Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia |
title_short | Modeling Brain Volume Using Deep Learning-Based Physical Activity Features in Patients With Dementia |
title_sort | modeling brain volume using deep learning-based physical activity features in patients with dementia |
topic | Neuroinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8959707/ https://www.ncbi.nlm.nih.gov/pubmed/35356447 http://dx.doi.org/10.3389/fninf.2022.795171 |
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