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Is There Any Mosaicism in REarranged During Transfection Variant in Hirschsprung Disease’s Patients?

BACKGROUND: Hirschsprung disease (HSCR) is a heterogeneous genetic disease characterized by the absence of ganglion cells in the intestinal tract. The REarranged during Transfection (RET) is the most responsible gene for its pathogenesis. RET’s somatic mosaicisms have been reported for HSCR; however...

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Autores principales: Iskandar, Kristy, Simanjaya, Susan, Indrawan, Taufik, Kalim, Alvin Santoso, Marcellus, Heriyanto, Didik Setyo, Gunadi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8960445/
https://www.ncbi.nlm.nih.gov/pubmed/35359901
http://dx.doi.org/10.3389/fped.2022.842820
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author Iskandar, Kristy
Simanjaya, Susan
Indrawan, Taufik
Kalim, Alvin Santoso
Marcellus,
Heriyanto, Didik Setyo
Gunadi,
author_facet Iskandar, Kristy
Simanjaya, Susan
Indrawan, Taufik
Kalim, Alvin Santoso
Marcellus,
Heriyanto, Didik Setyo
Gunadi,
author_sort Iskandar, Kristy
collection PubMed
description BACKGROUND: Hirschsprung disease (HSCR) is a heterogeneous genetic disease characterized by the absence of ganglion cells in the intestinal tract. The REarranged during Transfection (RET) is the most responsible gene for its pathogenesis. RET’s somatic mosaicisms have been reported for HSCR; however, they are still under-recognized. Therefore, we determined the frequency of somatic mutation of RET rs2435357 in HSCR patients at our institution. METHODS: We performed RET rs2435357 genotyping from 73 HSCR formalin-fixed and paraffin-embedded (FFPE) rectal and 60 non-HSCR controls using the PCR-RFLP method. Subsequently, we compared those frequencies of genotypes for RET rs2435357 with our previous genotyping data from 93 HSCR blood specimens. RESULTS: The frequencies of genotypes for RET rs2435357 in HSCR paraffin-embedded rectal were CC 0, CT 11 (15%), and TT 62 (85%), whereas their frequencies in HSCR blood samples were CC 4 (4.3%), CT 22 (23.7%), and TT 67 (72%). Those frequencies differences almost reached a significant level (p = 0.06). Moreover, the frequency of RET rs2435357 risk allele (T) was significantly higher in HSCR patients (135/146, 92.5%) than controls (46/120, 38.3%) (p = 3.4 × 10(–22)), with an odds ratio of 19.74 (95% confidence interval = 9.65–40.41). CONCLUSION: Our study suggests somatic mosaicism in HSCR patients. These findings further imply the complexity of the pathogenesis of HSCR. Moreover, our study confirms the RET rs2435357 as a significant genetic risk factor for HSCR patients.
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spelling pubmed-89604452022-03-30 Is There Any Mosaicism in REarranged During Transfection Variant in Hirschsprung Disease’s Patients? Iskandar, Kristy Simanjaya, Susan Indrawan, Taufik Kalim, Alvin Santoso Marcellus, Heriyanto, Didik Setyo Gunadi, Front Pediatr Pediatrics BACKGROUND: Hirschsprung disease (HSCR) is a heterogeneous genetic disease characterized by the absence of ganglion cells in the intestinal tract. The REarranged during Transfection (RET) is the most responsible gene for its pathogenesis. RET’s somatic mosaicisms have been reported for HSCR; however, they are still under-recognized. Therefore, we determined the frequency of somatic mutation of RET rs2435357 in HSCR patients at our institution. METHODS: We performed RET rs2435357 genotyping from 73 HSCR formalin-fixed and paraffin-embedded (FFPE) rectal and 60 non-HSCR controls using the PCR-RFLP method. Subsequently, we compared those frequencies of genotypes for RET rs2435357 with our previous genotyping data from 93 HSCR blood specimens. RESULTS: The frequencies of genotypes for RET rs2435357 in HSCR paraffin-embedded rectal were CC 0, CT 11 (15%), and TT 62 (85%), whereas their frequencies in HSCR blood samples were CC 4 (4.3%), CT 22 (23.7%), and TT 67 (72%). Those frequencies differences almost reached a significant level (p = 0.06). Moreover, the frequency of RET rs2435357 risk allele (T) was significantly higher in HSCR patients (135/146, 92.5%) than controls (46/120, 38.3%) (p = 3.4 × 10(–22)), with an odds ratio of 19.74 (95% confidence interval = 9.65–40.41). CONCLUSION: Our study suggests somatic mosaicism in HSCR patients. These findings further imply the complexity of the pathogenesis of HSCR. Moreover, our study confirms the RET rs2435357 as a significant genetic risk factor for HSCR patients. Frontiers Media S.A. 2022-03-10 /pmc/articles/PMC8960445/ /pubmed/35359901 http://dx.doi.org/10.3389/fped.2022.842820 Text en Copyright © 2022 Iskandar, Simanjaya, Indrawan, Kalim, Marcellus, Heriyanto and Gunadi. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Pediatrics
Iskandar, Kristy
Simanjaya, Susan
Indrawan, Taufik
Kalim, Alvin Santoso
Marcellus,
Heriyanto, Didik Setyo
Gunadi,
Is There Any Mosaicism in REarranged During Transfection Variant in Hirschsprung Disease’s Patients?
title Is There Any Mosaicism in REarranged During Transfection Variant in Hirschsprung Disease’s Patients?
title_full Is There Any Mosaicism in REarranged During Transfection Variant in Hirschsprung Disease’s Patients?
title_fullStr Is There Any Mosaicism in REarranged During Transfection Variant in Hirschsprung Disease’s Patients?
title_full_unstemmed Is There Any Mosaicism in REarranged During Transfection Variant in Hirschsprung Disease’s Patients?
title_short Is There Any Mosaicism in REarranged During Transfection Variant in Hirschsprung Disease’s Patients?
title_sort is there any mosaicism in rearranged during transfection variant in hirschsprung disease’s patients?
topic Pediatrics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8960445/
https://www.ncbi.nlm.nih.gov/pubmed/35359901
http://dx.doi.org/10.3389/fped.2022.842820
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