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DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images

Segmentation of intracranial aneurysm images acquired using magnetic resonance angiography (MRA) is essential for medical auxiliary treatments, which can effectively prevent subarachnoid hemorrhages. This paper proposes an image segmentation model based on a dense convolutional attention U-Net, whic...

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Autores principales: Yuan, Wenwen, Peng, Yanjun, Guo, Yanfei, Ren, Yande, Xue, Qianwen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Nature Singapore 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8960533/
https://www.ncbi.nlm.nih.gov/pubmed/35344098
http://dx.doi.org/10.1186/s42492-022-00105-4
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author Yuan, Wenwen
Peng, Yanjun
Guo, Yanfei
Ren, Yande
Xue, Qianwen
author_facet Yuan, Wenwen
Peng, Yanjun
Guo, Yanfei
Ren, Yande
Xue, Qianwen
author_sort Yuan, Wenwen
collection PubMed
description Segmentation of intracranial aneurysm images acquired using magnetic resonance angiography (MRA) is essential for medical auxiliary treatments, which can effectively prevent subarachnoid hemorrhages. This paper proposes an image segmentation model based on a dense convolutional attention U-Net, which fuses deep and rich semantic information with shallow-detail information for adaptive and accurate segmentation of MRA-acquired aneurysm images with large size differences. The U-Net model serves as a backbone, combining dense block and convolution block attention module (CBAM). The dense block is composed of a batch normalization layer, an randomly rectified linear unit activation function, and a convolutional layer, for mitigation of vanishing gradients, for multiplexing of aneurysm features, and for improving the network training efficiency. The CBAM is composed of a channel attention module and a spatial attention module, improving the segmentation performance of feature discrimination and enhancing the acquisition of key feature information. Owing to the large variation of aneurysm sizes, multi-scale fusion is performed during up-sampling, for adaptive segmentation of MRA-acquired aneurysm images. The model was tested on the MICCAI 2020 ADAM dataset, and its generalizability was validated on the clinical aneurysm dataset (aneurysm sizes: < 3 mm, 3–7 mm, and > 7 mm) supplied by the Affiliated Hospital of Qingdao University. A good clinical application segmentation performance was demonstrated.
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spelling pubmed-89605332022-04-12 DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images Yuan, Wenwen Peng, Yanjun Guo, Yanfei Ren, Yande Xue, Qianwen Vis Comput Ind Biomed Art Original Article Segmentation of intracranial aneurysm images acquired using magnetic resonance angiography (MRA) is essential for medical auxiliary treatments, which can effectively prevent subarachnoid hemorrhages. This paper proposes an image segmentation model based on a dense convolutional attention U-Net, which fuses deep and rich semantic information with shallow-detail information for adaptive and accurate segmentation of MRA-acquired aneurysm images with large size differences. The U-Net model serves as a backbone, combining dense block and convolution block attention module (CBAM). The dense block is composed of a batch normalization layer, an randomly rectified linear unit activation function, and a convolutional layer, for mitigation of vanishing gradients, for multiplexing of aneurysm features, and for improving the network training efficiency. The CBAM is composed of a channel attention module and a spatial attention module, improving the segmentation performance of feature discrimination and enhancing the acquisition of key feature information. Owing to the large variation of aneurysm sizes, multi-scale fusion is performed during up-sampling, for adaptive segmentation of MRA-acquired aneurysm images. The model was tested on the MICCAI 2020 ADAM dataset, and its generalizability was validated on the clinical aneurysm dataset (aneurysm sizes: < 3 mm, 3–7 mm, and > 7 mm) supplied by the Affiliated Hospital of Qingdao University. A good clinical application segmentation performance was demonstrated. Springer Nature Singapore 2022-03-28 /pmc/articles/PMC8960533/ /pubmed/35344098 http://dx.doi.org/10.1186/s42492-022-00105-4 Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Yuan, Wenwen
Peng, Yanjun
Guo, Yanfei
Ren, Yande
Xue, Qianwen
DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images
title DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images
title_full DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images
title_fullStr DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images
title_full_unstemmed DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images
title_short DCAU-Net: dense convolutional attention U-Net for segmentation of intracranial aneurysm images
title_sort dcau-net: dense convolutional attention u-net for segmentation of intracranial aneurysm images
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8960533/
https://www.ncbi.nlm.nih.gov/pubmed/35344098
http://dx.doi.org/10.1186/s42492-022-00105-4
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