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Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach

Plant-derived miRNAs can be found in the human body after dietary intake, and they can affect post-transcriptional gene regulation in human. It is important to identify targets to determine the possible effects in human genes by using computational approach. In this study, 787 possible mRNAs human t...

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Autores principales: Sánchez-Romo, Daniel, Hernández-Vásquez, César I., Pereyra-Alférez, Benito, García-García, Jorge H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: KeAi Publishing 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8961073/
https://www.ncbi.nlm.nih.gov/pubmed/35387280
http://dx.doi.org/10.1016/j.ncrna.2022.03.002
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author Sánchez-Romo, Daniel
Hernández-Vásquez, César I.
Pereyra-Alférez, Benito
García-García, Jorge H.
author_facet Sánchez-Romo, Daniel
Hernández-Vásquez, César I.
Pereyra-Alférez, Benito
García-García, Jorge H.
author_sort Sánchez-Romo, Daniel
collection PubMed
description Plant-derived miRNAs can be found in the human body after dietary intake, and they can affect post-transcriptional gene regulation in human. It is important to identify targets to determine the possible effects in human genes by using computational approach. In this study, 787 possible mRNAs human targets were predicted by 84 miRNAs of wheat. A total of 14 miRNAs were identified with individual binding to 33 mRNAs associated with schizophrenia, epilepsy, neurodevelopmental disorders, and various cancers, located in the 3′UTR of the mRNA. A functional enrichment was carried out, where the results showed associations to pathways such as dopaminergic synapse (hsa04728), and signaling pathways, significantly associated with the target genes. The prediction of target mRNAs in humans by wheat miRNAs, offer candidates that could facilitate the search and verification, which could be of relevance for future projects and therefor contribute in the therapeutic treatment of various human diseases.
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spelling pubmed-89610732022-04-05 Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach Sánchez-Romo, Daniel Hernández-Vásquez, César I. Pereyra-Alférez, Benito García-García, Jorge H. Noncoding RNA Res Original Research Article Plant-derived miRNAs can be found in the human body after dietary intake, and they can affect post-transcriptional gene regulation in human. It is important to identify targets to determine the possible effects in human genes by using computational approach. In this study, 787 possible mRNAs human targets were predicted by 84 miRNAs of wheat. A total of 14 miRNAs were identified with individual binding to 33 mRNAs associated with schizophrenia, epilepsy, neurodevelopmental disorders, and various cancers, located in the 3′UTR of the mRNA. A functional enrichment was carried out, where the results showed associations to pathways such as dopaminergic synapse (hsa04728), and signaling pathways, significantly associated with the target genes. The prediction of target mRNAs in humans by wheat miRNAs, offer candidates that could facilitate the search and verification, which could be of relevance for future projects and therefor contribute in the therapeutic treatment of various human diseases. KeAi Publishing 2022-03-18 /pmc/articles/PMC8961073/ /pubmed/35387280 http://dx.doi.org/10.1016/j.ncrna.2022.03.002 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Research Article
Sánchez-Romo, Daniel
Hernández-Vásquez, César I.
Pereyra-Alférez, Benito
García-García, Jorge H.
Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach
title Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach
title_full Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach
title_fullStr Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach
title_full_unstemmed Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach
title_short Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach
title_sort identification of potential target genes in homo sapiens, by mirna of triticum aestivum: a cross kingdom computational approach
topic Original Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8961073/
https://www.ncbi.nlm.nih.gov/pubmed/35387280
http://dx.doi.org/10.1016/j.ncrna.2022.03.002
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