Cargando…
Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach
Plant-derived miRNAs can be found in the human body after dietary intake, and they can affect post-transcriptional gene regulation in human. It is important to identify targets to determine the possible effects in human genes by using computational approach. In this study, 787 possible mRNAs human t...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
KeAi Publishing
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8961073/ https://www.ncbi.nlm.nih.gov/pubmed/35387280 http://dx.doi.org/10.1016/j.ncrna.2022.03.002 |
_version_ | 1784677517958840320 |
---|---|
author | Sánchez-Romo, Daniel Hernández-Vásquez, César I. Pereyra-Alférez, Benito García-García, Jorge H. |
author_facet | Sánchez-Romo, Daniel Hernández-Vásquez, César I. Pereyra-Alférez, Benito García-García, Jorge H. |
author_sort | Sánchez-Romo, Daniel |
collection | PubMed |
description | Plant-derived miRNAs can be found in the human body after dietary intake, and they can affect post-transcriptional gene regulation in human. It is important to identify targets to determine the possible effects in human genes by using computational approach. In this study, 787 possible mRNAs human targets were predicted by 84 miRNAs of wheat. A total of 14 miRNAs were identified with individual binding to 33 mRNAs associated with schizophrenia, epilepsy, neurodevelopmental disorders, and various cancers, located in the 3′UTR of the mRNA. A functional enrichment was carried out, where the results showed associations to pathways such as dopaminergic synapse (hsa04728), and signaling pathways, significantly associated with the target genes. The prediction of target mRNAs in humans by wheat miRNAs, offer candidates that could facilitate the search and verification, which could be of relevance for future projects and therefor contribute in the therapeutic treatment of various human diseases. |
format | Online Article Text |
id | pubmed-8961073 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | KeAi Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-89610732022-04-05 Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach Sánchez-Romo, Daniel Hernández-Vásquez, César I. Pereyra-Alférez, Benito García-García, Jorge H. Noncoding RNA Res Original Research Article Plant-derived miRNAs can be found in the human body after dietary intake, and they can affect post-transcriptional gene regulation in human. It is important to identify targets to determine the possible effects in human genes by using computational approach. In this study, 787 possible mRNAs human targets were predicted by 84 miRNAs of wheat. A total of 14 miRNAs were identified with individual binding to 33 mRNAs associated with schizophrenia, epilepsy, neurodevelopmental disorders, and various cancers, located in the 3′UTR of the mRNA. A functional enrichment was carried out, where the results showed associations to pathways such as dopaminergic synapse (hsa04728), and signaling pathways, significantly associated with the target genes. The prediction of target mRNAs in humans by wheat miRNAs, offer candidates that could facilitate the search and verification, which could be of relevance for future projects and therefor contribute in the therapeutic treatment of various human diseases. KeAi Publishing 2022-03-18 /pmc/articles/PMC8961073/ /pubmed/35387280 http://dx.doi.org/10.1016/j.ncrna.2022.03.002 Text en © 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Original Research Article Sánchez-Romo, Daniel Hernández-Vásquez, César I. Pereyra-Alférez, Benito García-García, Jorge H. Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach |
title | Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach |
title_full | Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach |
title_fullStr | Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach |
title_full_unstemmed | Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach |
title_short | Identification of potential target genes in Homo sapiens, by miRNA of Triticum aestivum: A cross kingdom computational approach |
title_sort | identification of potential target genes in homo sapiens, by mirna of triticum aestivum: a cross kingdom computational approach |
topic | Original Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8961073/ https://www.ncbi.nlm.nih.gov/pubmed/35387280 http://dx.doi.org/10.1016/j.ncrna.2022.03.002 |
work_keys_str_mv | AT sanchezromodaniel identificationofpotentialtargetgenesinhomosapiensbymirnaoftriticumaestivumacrosskingdomcomputationalapproach AT hernandezvasquezcesari identificationofpotentialtargetgenesinhomosapiensbymirnaoftriticumaestivumacrosskingdomcomputationalapproach AT pereyraalferezbenito identificationofpotentialtargetgenesinhomosapiensbymirnaoftriticumaestivumacrosskingdomcomputationalapproach AT garciagarciajorgeh identificationofpotentialtargetgenesinhomosapiensbymirnaoftriticumaestivumacrosskingdomcomputationalapproach |