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First Comprehensive Characterization of Phayre’s Leaf-Monkey (Trachypithecus phayrei) Karyotype

The chromosomal homologies of human (Homo sapiens—HSA) and Trachypithecus phayrei (TPH—Phayre’s leaf-monkey, family Cercopithecidae) have previously been studied by using classical chromosome staining/banding and fluorescence in situ hybridization (FISH) from the 1970s to 1990s. In this study, we ca...

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Autores principales: Fan, Xiaobo, Pinthong, Krit, de Oliveira, Edivaldo H. C., Tanomtong, Alongklod, Chen, Hongwei, Weise, Anja, Liehr, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8961670/
https://www.ncbi.nlm.nih.gov/pubmed/35360869
http://dx.doi.org/10.3389/fgene.2022.841681
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author Fan, Xiaobo
Pinthong, Krit
de Oliveira, Edivaldo H. C.
Tanomtong, Alongklod
Chen, Hongwei
Weise, Anja
Liehr, Thomas
author_facet Fan, Xiaobo
Pinthong, Krit
de Oliveira, Edivaldo H. C.
Tanomtong, Alongklod
Chen, Hongwei
Weise, Anja
Liehr, Thomas
author_sort Fan, Xiaobo
collection PubMed
description The chromosomal homologies of human (Homo sapiens—HSA) and Trachypithecus phayrei (TPH—Phayre’s leaf-monkey, family Cercopithecidae) have previously been studied by using classical chromosome staining/banding and fluorescence in situ hybridization (FISH) from the 1970s to 1990s. In this study, we carried out molecular cytogenetics applying human multicolor banding (MCB), locus-specific, and human heterochromatin-specific probes to establish the first detailed chromosomal map of TPH, which was not available until now. Accordingly, it was possible to precisely determine evolutionary-conserved breakpoints (ECBs) and the orientation of evolutionary-conserved segments compared to HSA. It could be shown that five chromosomes remained completely unchanged between these two species, and 16 chromosomes underwent only intrachromosomal changes. In addition, 50 ECBs that failed to be resolved in previous reports were exactly identified and characterized in this study. It could also be shown that 43.5% of TPH centromere positions were conserved and 56.5% were altered compared to HSA. Interestingly, 82% ECBs in TPH corresponded to human fragile sites. Overall, this study is an essential contribution to future studies and reviews on chromosomal evolution in Cercopithecidae.
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spelling pubmed-89616702022-03-30 First Comprehensive Characterization of Phayre’s Leaf-Monkey (Trachypithecus phayrei) Karyotype Fan, Xiaobo Pinthong, Krit de Oliveira, Edivaldo H. C. Tanomtong, Alongklod Chen, Hongwei Weise, Anja Liehr, Thomas Front Genet Genetics The chromosomal homologies of human (Homo sapiens—HSA) and Trachypithecus phayrei (TPH—Phayre’s leaf-monkey, family Cercopithecidae) have previously been studied by using classical chromosome staining/banding and fluorescence in situ hybridization (FISH) from the 1970s to 1990s. In this study, we carried out molecular cytogenetics applying human multicolor banding (MCB), locus-specific, and human heterochromatin-specific probes to establish the first detailed chromosomal map of TPH, which was not available until now. Accordingly, it was possible to precisely determine evolutionary-conserved breakpoints (ECBs) and the orientation of evolutionary-conserved segments compared to HSA. It could be shown that five chromosomes remained completely unchanged between these two species, and 16 chromosomes underwent only intrachromosomal changes. In addition, 50 ECBs that failed to be resolved in previous reports were exactly identified and characterized in this study. It could also be shown that 43.5% of TPH centromere positions were conserved and 56.5% were altered compared to HSA. Interestingly, 82% ECBs in TPH corresponded to human fragile sites. Overall, this study is an essential contribution to future studies and reviews on chromosomal evolution in Cercopithecidae. Frontiers Media S.A. 2022-03-11 /pmc/articles/PMC8961670/ /pubmed/35360869 http://dx.doi.org/10.3389/fgene.2022.841681 Text en Copyright © 2022 Fan, Pinthong, de Oliveira, Tanomtong, Chen, Weise and Liehr. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Fan, Xiaobo
Pinthong, Krit
de Oliveira, Edivaldo H. C.
Tanomtong, Alongklod
Chen, Hongwei
Weise, Anja
Liehr, Thomas
First Comprehensive Characterization of Phayre’s Leaf-Monkey (Trachypithecus phayrei) Karyotype
title First Comprehensive Characterization of Phayre’s Leaf-Monkey (Trachypithecus phayrei) Karyotype
title_full First Comprehensive Characterization of Phayre’s Leaf-Monkey (Trachypithecus phayrei) Karyotype
title_fullStr First Comprehensive Characterization of Phayre’s Leaf-Monkey (Trachypithecus phayrei) Karyotype
title_full_unstemmed First Comprehensive Characterization of Phayre’s Leaf-Monkey (Trachypithecus phayrei) Karyotype
title_short First Comprehensive Characterization of Phayre’s Leaf-Monkey (Trachypithecus phayrei) Karyotype
title_sort first comprehensive characterization of phayre’s leaf-monkey (trachypithecus phayrei) karyotype
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8961670/
https://www.ncbi.nlm.nih.gov/pubmed/35360869
http://dx.doi.org/10.3389/fgene.2022.841681
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