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VALCOR: a protocol for the validation of SARS-corona virus-2 assays

BACKGROUND: Testing for SARS-CoV-2, together with vaccination, is one of the most vital strategies in curbing the current COVID-19 pandemic. The pandemic has led to an unprecedented need for diagnostic testing and the rapid emergence of an abundance of commercial assays on the market. Due to the nat...

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Autores principales: Arbyn, Marc, Dhillon, Sharonjit Kaur, Martinelli, Marianna, Simoens, Cindy, Cuypers, Lize, Bode, Jannes, Van Ranst, Marc, Corbisier, Philippe, Bonde, Jesper, Cocuzza, Clementina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8962941/
https://www.ncbi.nlm.nih.gov/pubmed/35351191
http://dx.doi.org/10.1186/s13690-022-00869-4
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author Arbyn, Marc
Dhillon, Sharonjit Kaur
Martinelli, Marianna
Simoens, Cindy
Cuypers, Lize
Bode, Jannes
Van Ranst, Marc
Corbisier, Philippe
Bonde, Jesper
Cocuzza, Clementina
author_facet Arbyn, Marc
Dhillon, Sharonjit Kaur
Martinelli, Marianna
Simoens, Cindy
Cuypers, Lize
Bode, Jannes
Van Ranst, Marc
Corbisier, Philippe
Bonde, Jesper
Cocuzza, Clementina
author_sort Arbyn, Marc
collection PubMed
description BACKGROUND: Testing for SARS-CoV-2, together with vaccination, is one of the most vital strategies in curbing the current COVID-19 pandemic. The pandemic has led to an unprecedented need for diagnostic testing and the rapid emergence of an abundance of commercial assays on the market. Due to the nature of the pandemic and in the interest of health protection, many of these assays received provisional authorisation for emergency use without thorough validation. To limit false negative and false positive results, it is key to define common criteria that SARS-CoV-2 assays need to fulfil. VALCOR or “VALidation of SARS-CORona Virus-2 assays” is a protocol designed to set up a framework for test validation of SARS-CoV-2 virus assays. OBJECTIVES: VALCOR is a study protocol for the validation of assays used for confirmation of the presence of SARS-CoV-2 in patients with COVID-19 disease or the screening of carriers of SARS-CoV-2 virus by the identification of viral RNA in oropharyngeal and/or nasopharyngeal specimens or other specimens from the human respiratory tract. METHODS: The VALCOR panel of samples will contain clinical human specimens and standardised artificial specimens. The collection of clinical specimens will include nasopharyngeal or oropharyngeal specimens or other specimens from the respiratory tract obtained from COVID-19 patients and healthy carriers of SARS-CoV-2 as well as specimens from subjects not carrying SARS-CoV-2. Artificial specimens include calibrated amounts of viral RNA of SARS-CoV-2 sequences provided by established competent agencies that produce reference materials for the assessment of the limit of detection of each assay. The panel of samples are sent from a central reference laboratory (having access to biobanks of clinical specimens tested already for SARS-CoV-2 with a reference comparator assay) to participating laboratories for testing with a SARS-CoV-2 index assay that requires evaluation. DISCUSSION: VALCOR provides a harmonised and standard framework to benchmark the testing performance of SARS-CoV-2 assays that are rapidly evolving. As the pandemic incited an urgent need for testing capacity, there is a gap in the comprehensive validation of SARS-CoV-2 assays. This study will generate comprehensive validation data for assays used for the diagnosis of SARS-CoV-2 and may serve as a basis for other validation protocols. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13690-022-00869-4.
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spelling pubmed-89629412022-03-30 VALCOR: a protocol for the validation of SARS-corona virus-2 assays Arbyn, Marc Dhillon, Sharonjit Kaur Martinelli, Marianna Simoens, Cindy Cuypers, Lize Bode, Jannes Van Ranst, Marc Corbisier, Philippe Bonde, Jesper Cocuzza, Clementina Arch Public Health Study Protocol BACKGROUND: Testing for SARS-CoV-2, together with vaccination, is one of the most vital strategies in curbing the current COVID-19 pandemic. The pandemic has led to an unprecedented need for diagnostic testing and the rapid emergence of an abundance of commercial assays on the market. Due to the nature of the pandemic and in the interest of health protection, many of these assays received provisional authorisation for emergency use without thorough validation. To limit false negative and false positive results, it is key to define common criteria that SARS-CoV-2 assays need to fulfil. VALCOR or “VALidation of SARS-CORona Virus-2 assays” is a protocol designed to set up a framework for test validation of SARS-CoV-2 virus assays. OBJECTIVES: VALCOR is a study protocol for the validation of assays used for confirmation of the presence of SARS-CoV-2 in patients with COVID-19 disease or the screening of carriers of SARS-CoV-2 virus by the identification of viral RNA in oropharyngeal and/or nasopharyngeal specimens or other specimens from the human respiratory tract. METHODS: The VALCOR panel of samples will contain clinical human specimens and standardised artificial specimens. The collection of clinical specimens will include nasopharyngeal or oropharyngeal specimens or other specimens from the respiratory tract obtained from COVID-19 patients and healthy carriers of SARS-CoV-2 as well as specimens from subjects not carrying SARS-CoV-2. Artificial specimens include calibrated amounts of viral RNA of SARS-CoV-2 sequences provided by established competent agencies that produce reference materials for the assessment of the limit of detection of each assay. The panel of samples are sent from a central reference laboratory (having access to biobanks of clinical specimens tested already for SARS-CoV-2 with a reference comparator assay) to participating laboratories for testing with a SARS-CoV-2 index assay that requires evaluation. DISCUSSION: VALCOR provides a harmonised and standard framework to benchmark the testing performance of SARS-CoV-2 assays that are rapidly evolving. As the pandemic incited an urgent need for testing capacity, there is a gap in the comprehensive validation of SARS-CoV-2 assays. This study will generate comprehensive validation data for assays used for the diagnosis of SARS-CoV-2 and may serve as a basis for other validation protocols. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13690-022-00869-4. BioMed Central 2022-03-29 /pmc/articles/PMC8962941/ /pubmed/35351191 http://dx.doi.org/10.1186/s13690-022-00869-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Study Protocol
Arbyn, Marc
Dhillon, Sharonjit Kaur
Martinelli, Marianna
Simoens, Cindy
Cuypers, Lize
Bode, Jannes
Van Ranst, Marc
Corbisier, Philippe
Bonde, Jesper
Cocuzza, Clementina
VALCOR: a protocol for the validation of SARS-corona virus-2 assays
title VALCOR: a protocol for the validation of SARS-corona virus-2 assays
title_full VALCOR: a protocol for the validation of SARS-corona virus-2 assays
title_fullStr VALCOR: a protocol for the validation of SARS-corona virus-2 assays
title_full_unstemmed VALCOR: a protocol for the validation of SARS-corona virus-2 assays
title_short VALCOR: a protocol for the validation of SARS-corona virus-2 assays
title_sort valcor: a protocol for the validation of sars-corona virus-2 assays
topic Study Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8962941/
https://www.ncbi.nlm.nih.gov/pubmed/35351191
http://dx.doi.org/10.1186/s13690-022-00869-4
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