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Denoising of Fluorescence Image on the Surface of Quantum Dot/Nanoporous Silicon Biosensors

In the process of biological detection of porous silicon photonic crystals based on quantum dots, the concentration of target organisms can be indirectly measured via the change in the gray value of the fluorescence emitted from the quantum dots in the porous silicon pores before and after the biolo...

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Detalles Bibliográficos
Autores principales: Liu, Yong, Sun, Miao, Jia, Zhenhong, Yang, Jie, Kasabov, Nikola K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8962970/
https://www.ncbi.nlm.nih.gov/pubmed/35214261
http://dx.doi.org/10.3390/s22041366
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author Liu, Yong
Sun, Miao
Jia, Zhenhong
Yang, Jie
Kasabov, Nikola K.
author_facet Liu, Yong
Sun, Miao
Jia, Zhenhong
Yang, Jie
Kasabov, Nikola K.
author_sort Liu, Yong
collection PubMed
description In the process of biological detection of porous silicon photonic crystals based on quantum dots, the concentration of target organisms can be indirectly measured via the change in the gray value of the fluorescence emitted from the quantum dots in the porous silicon pores before and after the biological reaction on the surface of the device. However, due to the disordered nanostructures in porous silicon and the roughness of the surface, the fluorescence images on the surface contain noise. This paper analyzes the type of noise and its influence on the gray value of fluorescent images. The change in the gray value caused by noise greatly reduces the detection sensitivity. To reduce the influence of noise on the gray value of quantum dot fluorescence images, this paper proposes a denoising method based on gray compression and nonlocal anisotropic diffusion filtering. We used the proposed method to denoise the quantum dot fluorescence image after DNA hybridization in a Bragg structure porous silicon device. The experimental results show that the sensitivity of digital image detection improved significantly after denoising.
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spelling pubmed-89629702022-03-30 Denoising of Fluorescence Image on the Surface of Quantum Dot/Nanoporous Silicon Biosensors Liu, Yong Sun, Miao Jia, Zhenhong Yang, Jie Kasabov, Nikola K. Sensors (Basel) Article In the process of biological detection of porous silicon photonic crystals based on quantum dots, the concentration of target organisms can be indirectly measured via the change in the gray value of the fluorescence emitted from the quantum dots in the porous silicon pores before and after the biological reaction on the surface of the device. However, due to the disordered nanostructures in porous silicon and the roughness of the surface, the fluorescence images on the surface contain noise. This paper analyzes the type of noise and its influence on the gray value of fluorescent images. The change in the gray value caused by noise greatly reduces the detection sensitivity. To reduce the influence of noise on the gray value of quantum dot fluorescence images, this paper proposes a denoising method based on gray compression and nonlocal anisotropic diffusion filtering. We used the proposed method to denoise the quantum dot fluorescence image after DNA hybridization in a Bragg structure porous silicon device. The experimental results show that the sensitivity of digital image detection improved significantly after denoising. MDPI 2022-02-10 /pmc/articles/PMC8962970/ /pubmed/35214261 http://dx.doi.org/10.3390/s22041366 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Liu, Yong
Sun, Miao
Jia, Zhenhong
Yang, Jie
Kasabov, Nikola K.
Denoising of Fluorescence Image on the Surface of Quantum Dot/Nanoporous Silicon Biosensors
title Denoising of Fluorescence Image on the Surface of Quantum Dot/Nanoporous Silicon Biosensors
title_full Denoising of Fluorescence Image on the Surface of Quantum Dot/Nanoporous Silicon Biosensors
title_fullStr Denoising of Fluorescence Image on the Surface of Quantum Dot/Nanoporous Silicon Biosensors
title_full_unstemmed Denoising of Fluorescence Image on the Surface of Quantum Dot/Nanoporous Silicon Biosensors
title_short Denoising of Fluorescence Image on the Surface of Quantum Dot/Nanoporous Silicon Biosensors
title_sort denoising of fluorescence image on the surface of quantum dot/nanoporous silicon biosensors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8962970/
https://www.ncbi.nlm.nih.gov/pubmed/35214261
http://dx.doi.org/10.3390/s22041366
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