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Prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features
Non-muscle invasive bladder cancer (NMIBC) generally has a good prognosis; however, recurrence after transurethral resection (TUR), the standard primary treatment, is a major problem. Clinical management after TUR has been based on risk classification using clinicopathological factors, but these cla...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group US
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8964412/ https://www.ncbi.nlm.nih.gov/pubmed/34716417 http://dx.doi.org/10.1038/s41379-021-00955-y |
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author | Tokuyama, Naoto Saito, Akira Muraoka, Ryu Matsubara, Shuya Hashimoto, Takeshi Satake, Naoya Matsubayashi, Jun Nagao, Toshitaka Mirza, Aashiq H. Graf, Hans-Peter Cosatto, Eric Wu, Chin-Lee Kuroda, Masahiko Ohno, Yoshio |
author_facet | Tokuyama, Naoto Saito, Akira Muraoka, Ryu Matsubara, Shuya Hashimoto, Takeshi Satake, Naoya Matsubayashi, Jun Nagao, Toshitaka Mirza, Aashiq H. Graf, Hans-Peter Cosatto, Eric Wu, Chin-Lee Kuroda, Masahiko Ohno, Yoshio |
author_sort | Tokuyama, Naoto |
collection | PubMed |
description | Non-muscle invasive bladder cancer (NMIBC) generally has a good prognosis; however, recurrence after transurethral resection (TUR), the standard primary treatment, is a major problem. Clinical management after TUR has been based on risk classification using clinicopathological factors, but these classifications are not complete. In this study, we attempted to predict early recurrence of NMIBC based on machine learning of quantitative morphological features. In general, structural, cellular, and nuclear atypia are evaluated to determine cancer atypia. However, since it is difficult to accurately quantify structural atypia from TUR specimens, in this study, we used only nuclear atypia and analyzed it using feature extraction followed by classification using Support Vector Machine and Random Forest machine learning algorithms. For the analysis, 125 patients diagnosed with NMIBC were used; data from 95 patients were randomly selected for the training set, and data from 30 patients were randomly selected for the test set. The results showed that the support vector machine-based model predicted recurrence within 2 years after TUR with a probability of 90% and the random forest-based model with probability of 86.7%. In the future, the system can be used to objectively predict NMIBC recurrence after TUR. |
format | Online Article Text |
id | pubmed-8964412 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group US |
record_format | MEDLINE/PubMed |
spelling | pubmed-89644122022-04-07 Prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features Tokuyama, Naoto Saito, Akira Muraoka, Ryu Matsubara, Shuya Hashimoto, Takeshi Satake, Naoya Matsubayashi, Jun Nagao, Toshitaka Mirza, Aashiq H. Graf, Hans-Peter Cosatto, Eric Wu, Chin-Lee Kuroda, Masahiko Ohno, Yoshio Mod Pathol Article Non-muscle invasive bladder cancer (NMIBC) generally has a good prognosis; however, recurrence after transurethral resection (TUR), the standard primary treatment, is a major problem. Clinical management after TUR has been based on risk classification using clinicopathological factors, but these classifications are not complete. In this study, we attempted to predict early recurrence of NMIBC based on machine learning of quantitative morphological features. In general, structural, cellular, and nuclear atypia are evaluated to determine cancer atypia. However, since it is difficult to accurately quantify structural atypia from TUR specimens, in this study, we used only nuclear atypia and analyzed it using feature extraction followed by classification using Support Vector Machine and Random Forest machine learning algorithms. For the analysis, 125 patients diagnosed with NMIBC were used; data from 95 patients were randomly selected for the training set, and data from 30 patients were randomly selected for the test set. The results showed that the support vector machine-based model predicted recurrence within 2 years after TUR with a probability of 90% and the random forest-based model with probability of 86.7%. In the future, the system can be used to objectively predict NMIBC recurrence after TUR. Nature Publishing Group US 2021-10-29 2022 /pmc/articles/PMC8964412/ /pubmed/34716417 http://dx.doi.org/10.1038/s41379-021-00955-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Tokuyama, Naoto Saito, Akira Muraoka, Ryu Matsubara, Shuya Hashimoto, Takeshi Satake, Naoya Matsubayashi, Jun Nagao, Toshitaka Mirza, Aashiq H. Graf, Hans-Peter Cosatto, Eric Wu, Chin-Lee Kuroda, Masahiko Ohno, Yoshio Prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features |
title | Prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features |
title_full | Prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features |
title_fullStr | Prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features |
title_full_unstemmed | Prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features |
title_short | Prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features |
title_sort | prediction of non-muscle invasive bladder cancer recurrence using machine learning of quantitative nuclear features |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8964412/ https://www.ncbi.nlm.nih.gov/pubmed/34716417 http://dx.doi.org/10.1038/s41379-021-00955-y |
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