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Single‐cell RNA sequencing technologies and applications: A brief overview

Single‐cell RNA sequencing (scRNA‐seq) technology has become the state‐of‐the‐art approach for unravelling the heterogeneity and complexity of RNA transcripts within individual cells, as well as revealing the composition of different cell types and functions within highly organized tissues/organs/or...

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Autores principales: Jovic, Dragomirka, Liang, Xue, Zeng, Hua, Lin, Lin, Xu, Fengping, Luo, Yonglun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8964935/
https://www.ncbi.nlm.nih.gov/pubmed/35352511
http://dx.doi.org/10.1002/ctm2.694
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author Jovic, Dragomirka
Liang, Xue
Zeng, Hua
Lin, Lin
Xu, Fengping
Luo, Yonglun
author_facet Jovic, Dragomirka
Liang, Xue
Zeng, Hua
Lin, Lin
Xu, Fengping
Luo, Yonglun
author_sort Jovic, Dragomirka
collection PubMed
description Single‐cell RNA sequencing (scRNA‐seq) technology has become the state‐of‐the‐art approach for unravelling the heterogeneity and complexity of RNA transcripts within individual cells, as well as revealing the composition of different cell types and functions within highly organized tissues/organs/organisms. Since its first discovery in 2009, studies based on scRNA‐seq provide massive information across different fields making exciting new discoveries in better understanding the composition and interaction of cells within humans, model animals and plants. In this review, we provide a concise overview about the scRNA‐seq technology, experimental and computational procedures for transforming the biological and molecular processes into computational and statistical data. We also provide an explanation of the key technological steps in implementing the technology. We highlight a few examples on how scRNA‐seq can provide unique information for better understanding health and diseases. One important application of the scRNA‐seq technology is to build a better and high‐resolution catalogue of cells in all living organism, commonly known as atlas, which is key resource to better understand and provide a solution in treating diseases. While great promises have been demonstrated with the technology in all areas, we further highlight a few remaining challenges to be overcome and its great potentials in transforming current protocols in disease diagnosis and treatment.
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spelling pubmed-89649352022-04-05 Single‐cell RNA sequencing technologies and applications: A brief overview Jovic, Dragomirka Liang, Xue Zeng, Hua Lin, Lin Xu, Fengping Luo, Yonglun Clin Transl Med Reviews Single‐cell RNA sequencing (scRNA‐seq) technology has become the state‐of‐the‐art approach for unravelling the heterogeneity and complexity of RNA transcripts within individual cells, as well as revealing the composition of different cell types and functions within highly organized tissues/organs/organisms. Since its first discovery in 2009, studies based on scRNA‐seq provide massive information across different fields making exciting new discoveries in better understanding the composition and interaction of cells within humans, model animals and plants. In this review, we provide a concise overview about the scRNA‐seq technology, experimental and computational procedures for transforming the biological and molecular processes into computational and statistical data. We also provide an explanation of the key technological steps in implementing the technology. We highlight a few examples on how scRNA‐seq can provide unique information for better understanding health and diseases. One important application of the scRNA‐seq technology is to build a better and high‐resolution catalogue of cells in all living organism, commonly known as atlas, which is key resource to better understand and provide a solution in treating diseases. While great promises have been demonstrated with the technology in all areas, we further highlight a few remaining challenges to be overcome and its great potentials in transforming current protocols in disease diagnosis and treatment. John Wiley and Sons Inc. 2022-03-29 /pmc/articles/PMC8964935/ /pubmed/35352511 http://dx.doi.org/10.1002/ctm2.694 Text en © 2022 The Authors. Clinical and Translational Medicine published by John Wiley & Sons Australia, Ltd on behalf of Shanghai Institute of Clinical Bioinformatics https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Reviews
Jovic, Dragomirka
Liang, Xue
Zeng, Hua
Lin, Lin
Xu, Fengping
Luo, Yonglun
Single‐cell RNA sequencing technologies and applications: A brief overview
title Single‐cell RNA sequencing technologies and applications: A brief overview
title_full Single‐cell RNA sequencing technologies and applications: A brief overview
title_fullStr Single‐cell RNA sequencing technologies and applications: A brief overview
title_full_unstemmed Single‐cell RNA sequencing technologies and applications: A brief overview
title_short Single‐cell RNA sequencing technologies and applications: A brief overview
title_sort single‐cell rna sequencing technologies and applications: a brief overview
topic Reviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8964935/
https://www.ncbi.nlm.nih.gov/pubmed/35352511
http://dx.doi.org/10.1002/ctm2.694
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