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Increasing Taxa Sampling Provides New Insights on the Phylogenetic Relationship Between Eriobotrya and Rhaphiolepis
Eriobotrya (Rosaceae) is an economically important genus with around 30 species. It is widely distributed in tropical and warm temperate regions of Asia, with most of its species in China, Myanmar, and Vietnam. However, Eriobotrya is often confused with the smaller genus Rhaphiolepis, and the phylog...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8964991/ https://www.ncbi.nlm.nih.gov/pubmed/35368713 http://dx.doi.org/10.3389/fgene.2022.831206 |
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author | Dong, Zhanghong Qu, Shaohong Landrein, Sven Yu, Wen-Bin Xin, Jing Zhao, Wenzhi Song, Yu Tan, Yunhong Xin, Peiyao |
author_facet | Dong, Zhanghong Qu, Shaohong Landrein, Sven Yu, Wen-Bin Xin, Jing Zhao, Wenzhi Song, Yu Tan, Yunhong Xin, Peiyao |
author_sort | Dong, Zhanghong |
collection | PubMed |
description | Eriobotrya (Rosaceae) is an economically important genus with around 30 species. It is widely distributed in tropical and warm temperate regions of Asia, with most of its species in China, Myanmar, and Vietnam. However, Eriobotrya is often confused with the smaller genus Rhaphiolepis, and the phylogenetic relationships between the two genera are controversial. Here we present phylogenetic analyses of 38 newly generated Eriobotrya and Rhaphiolepis nrDNA together with 16 sequences of nrDNA and 28 sequences of ITS obtained from GenBank, representing 28 species of Eriobotrya and 12 species of Rhaphiolepis, in order to reconstruct highly supported relationships for the two genera. Contrary to previous research based on limited sampling, our results highlight the monophyly of Eriobotrya as well as Rhaphiolepis. The topology recovered here is consistent with key morphological synapomorphies such as the persistent sepals in Eriobotrya. Our findings show that increased sampling of taxa can provide a more robust phylogeny through reducing phylogenetic error and increasing overall phylogenetic accuracy. |
format | Online Article Text |
id | pubmed-8964991 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89649912022-03-31 Increasing Taxa Sampling Provides New Insights on the Phylogenetic Relationship Between Eriobotrya and Rhaphiolepis Dong, Zhanghong Qu, Shaohong Landrein, Sven Yu, Wen-Bin Xin, Jing Zhao, Wenzhi Song, Yu Tan, Yunhong Xin, Peiyao Front Genet Genetics Eriobotrya (Rosaceae) is an economically important genus with around 30 species. It is widely distributed in tropical and warm temperate regions of Asia, with most of its species in China, Myanmar, and Vietnam. However, Eriobotrya is often confused with the smaller genus Rhaphiolepis, and the phylogenetic relationships between the two genera are controversial. Here we present phylogenetic analyses of 38 newly generated Eriobotrya and Rhaphiolepis nrDNA together with 16 sequences of nrDNA and 28 sequences of ITS obtained from GenBank, representing 28 species of Eriobotrya and 12 species of Rhaphiolepis, in order to reconstruct highly supported relationships for the two genera. Contrary to previous research based on limited sampling, our results highlight the monophyly of Eriobotrya as well as Rhaphiolepis. The topology recovered here is consistent with key morphological synapomorphies such as the persistent sepals in Eriobotrya. Our findings show that increased sampling of taxa can provide a more robust phylogeny through reducing phylogenetic error and increasing overall phylogenetic accuracy. Frontiers Media S.A. 2022-03-15 /pmc/articles/PMC8964991/ /pubmed/35368713 http://dx.doi.org/10.3389/fgene.2022.831206 Text en Copyright © 2022 Dong, Qu, Landrein, Yu, Xin, Zhao, Song, Tan and Xin. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Dong, Zhanghong Qu, Shaohong Landrein, Sven Yu, Wen-Bin Xin, Jing Zhao, Wenzhi Song, Yu Tan, Yunhong Xin, Peiyao Increasing Taxa Sampling Provides New Insights on the Phylogenetic Relationship Between Eriobotrya and Rhaphiolepis |
title | Increasing Taxa Sampling Provides New Insights on the Phylogenetic Relationship Between Eriobotrya and Rhaphiolepis
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title_full | Increasing Taxa Sampling Provides New Insights on the Phylogenetic Relationship Between Eriobotrya and Rhaphiolepis
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title_fullStr | Increasing Taxa Sampling Provides New Insights on the Phylogenetic Relationship Between Eriobotrya and Rhaphiolepis
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title_full_unstemmed | Increasing Taxa Sampling Provides New Insights on the Phylogenetic Relationship Between Eriobotrya and Rhaphiolepis
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title_short | Increasing Taxa Sampling Provides New Insights on the Phylogenetic Relationship Between Eriobotrya and Rhaphiolepis
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title_sort | increasing taxa sampling provides new insights on the phylogenetic relationship between eriobotrya and rhaphiolepis |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8964991/ https://www.ncbi.nlm.nih.gov/pubmed/35368713 http://dx.doi.org/10.3389/fgene.2022.831206 |
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