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A robust and parsimonious machine learning method to predict ICU admission of COVID-19 patients
ABSTRACT: In this article, we discuss the development of prognostic machine learning (ML) models for COVID-19 progression, by focusing on the task of predicting ICU admission within (any of) the next 5 days. On the basis of 6,625 complete blood count (CBC) tests from 1,004 patients, of which 18% wer...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8965547/ https://www.ncbi.nlm.nih.gov/pubmed/35353302 http://dx.doi.org/10.1007/s11517-022-02543-x |
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author | Famiglini, Lorenzo Campagner, Andrea Carobene, Anna Cabitza, Federico |
author_facet | Famiglini, Lorenzo Campagner, Andrea Carobene, Anna Cabitza, Federico |
author_sort | Famiglini, Lorenzo |
collection | PubMed |
description | ABSTRACT: In this article, we discuss the development of prognostic machine learning (ML) models for COVID-19 progression, by focusing on the task of predicting ICU admission within (any of) the next 5 days. On the basis of 6,625 complete blood count (CBC) tests from 1,004 patients, of which 18% were admitted to intensive care unit (ICU), we created four ML models, by adopting a robust development procedure which was designed to minimize risks of bias and over-fitting, according to reference guidelines. The best model, a support vector machine, had an AUC of .85, a Brier score of .14, and a standardized net benefit of .69: these scores indicate that the model performed well over a variety of prediction criteria. We also conducted an interpretability study to back up our findings, showing that the data on which the developed model is based is consistent with the current medical literature. This also demonstrates that CBC data and ML methods can be used to predict COVID-19 patients’ ICU admission at a relatively low cost: in particular, since CBC data can be quickly obtained by means of routine blood exams, our models could be used in resource-constrained settings and provide health practitioners with rapid and reliable indications. GRAPHICAL ABSTRACT: [Image: see text] |
format | Online Article Text |
id | pubmed-8965547 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-89655472022-03-30 A robust and parsimonious machine learning method to predict ICU admission of COVID-19 patients Famiglini, Lorenzo Campagner, Andrea Carobene, Anna Cabitza, Federico Med Biol Eng Comput Review Article ABSTRACT: In this article, we discuss the development of prognostic machine learning (ML) models for COVID-19 progression, by focusing on the task of predicting ICU admission within (any of) the next 5 days. On the basis of 6,625 complete blood count (CBC) tests from 1,004 patients, of which 18% were admitted to intensive care unit (ICU), we created four ML models, by adopting a robust development procedure which was designed to minimize risks of bias and over-fitting, according to reference guidelines. The best model, a support vector machine, had an AUC of .85, a Brier score of .14, and a standardized net benefit of .69: these scores indicate that the model performed well over a variety of prediction criteria. We also conducted an interpretability study to back up our findings, showing that the data on which the developed model is based is consistent with the current medical literature. This also demonstrates that CBC data and ML methods can be used to predict COVID-19 patients’ ICU admission at a relatively low cost: in particular, since CBC data can be quickly obtained by means of routine blood exams, our models could be used in resource-constrained settings and provide health practitioners with rapid and reliable indications. GRAPHICAL ABSTRACT: [Image: see text] Springer Berlin Heidelberg 2022-03-30 /pmc/articles/PMC8965547/ /pubmed/35353302 http://dx.doi.org/10.1007/s11517-022-02543-x Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Review Article Famiglini, Lorenzo Campagner, Andrea Carobene, Anna Cabitza, Federico A robust and parsimonious machine learning method to predict ICU admission of COVID-19 patients |
title | A robust and parsimonious machine learning method to predict ICU admission of COVID-19 patients |
title_full | A robust and parsimonious machine learning method to predict ICU admission of COVID-19 patients |
title_fullStr | A robust and parsimonious machine learning method to predict ICU admission of COVID-19 patients |
title_full_unstemmed | A robust and parsimonious machine learning method to predict ICU admission of COVID-19 patients |
title_short | A robust and parsimonious machine learning method to predict ICU admission of COVID-19 patients |
title_sort | robust and parsimonious machine learning method to predict icu admission of covid-19 patients |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8965547/ https://www.ncbi.nlm.nih.gov/pubmed/35353302 http://dx.doi.org/10.1007/s11517-022-02543-x |
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