Cargando…
Landscape of KRAS(G12C), Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers
Promising single-agent activity from sotorasib and adagrasib in KRAS(G12C)-mutant tumors has provided clinical evidence of effective KRAS signaling inhibition. However, comprehensive analysis of KRAS-variant prevalence, genomic alterations, and the relationship between KRAS and immuno-oncology bioma...
Autores principales: | , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer Health
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8966967/ https://www.ncbi.nlm.nih.gov/pubmed/35319967 http://dx.doi.org/10.1200/PO.21.00245 |
_version_ | 1784678737607917568 |
---|---|
author | Salem, Mohamed E. El-Refai, Sherif M. Sha, Wei Puccini, Alberto Grothey, Axel George, Thomas J. Hwang, Jimmy J. O'Neil, Bert Barrett, Alexander S. Kadakia, Kunal C. Musselwhite, Laura W. Raghavan, Derek Van Cutsem, Eric Tabernero, Josep Tie, Jeanne |
author_facet | Salem, Mohamed E. El-Refai, Sherif M. Sha, Wei Puccini, Alberto Grothey, Axel George, Thomas J. Hwang, Jimmy J. O'Neil, Bert Barrett, Alexander S. Kadakia, Kunal C. Musselwhite, Laura W. Raghavan, Derek Van Cutsem, Eric Tabernero, Josep Tie, Jeanne |
author_sort | Salem, Mohamed E. |
collection | PubMed |
description | Promising single-agent activity from sotorasib and adagrasib in KRAS(G12C)-mutant tumors has provided clinical evidence of effective KRAS signaling inhibition. However, comprehensive analysis of KRAS-variant prevalence, genomic alterations, and the relationship between KRAS and immuno-oncology biomarkers is lacking. MATERIALS AND METHODS: Retrospective analysis of deidentified records from 79,004 patients with various cancers who underwent next-generation sequencing was performed. Fisher's exact test evaluated the association between cancer subtypes and KRAS variants. Logistic regression assessed KRAS(G12C) comutations with other oncogenes and the association between KRAS variants and immuno-oncology biomarkers. RESULTS: Of the 79,004 samples assessed, 13,758 (17.4%) harbored KRAS mutations, with 1,632 (11.9%) harboring KRAS(G12C) and 12,126 (88.1%) harboring other KRAS variants (KRAS(non-G12C)). Compared with KRAS(non-G12C) across all tumor subtypes, KRAS(G12C) was more prevalent in females (56% v 51%, false discovery rate-adjusted P value [FDR-P] = .0006), current or prior smokers (85% v 56%, FDR-P < .0001), and patients age > 60 years (73% v 63%, FDR-P ≤ .0001). The most frequent KRAS variants across all subtypes were G12D (29.5%), G12V (23.0%), G12C (11.9%), G13D (6.5%), and G12R (6.2%). KRAS(G12C) was most prevalent in patients with non–small-cell lung cancer (9%), appendiceal (3.9%), colorectal (3.2%), tumor of unknown origin (1.6%), small bowel (1.43%), and pancreatic (1.3%) cancers. Compared with KRAS(non-G12C)-mutated, KRAS(G12C)-mutated tumors were significantly associated with tumor mutational burden-high status (17.9% v 8.4%, odds ratio [OR] = 2.38; FDR-P < .0001). KRAS(G12C)-mutated tumors exhibited a distinct comutation profile from KRAS(non-G12C)-mutated tumors, including higher comutations of STK11 (20.59% v 5.95%, OR = 4.10; FDR-P < .01) and KEAP1 (15.38% v 4.61%, OR = 3.76; FDR-P < .01). CONCLUSION: This study presents the first large-scale, pan-cancer genomic characterization of KRAS(G12C). The KRAS(G12C) mutation was more prevalent in females and older patients and appeared to be associated with smoking status. KRAS(G12C) tumors exhibited a distinct comutation profile and were associated with tumor mutational burden-high status. |
format | Online Article Text |
id | pubmed-8966967 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Wolters Kluwer Health |
record_format | MEDLINE/PubMed |
spelling | pubmed-89669672022-03-31 Landscape of KRAS(G12C), Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers Salem, Mohamed E. El-Refai, Sherif M. Sha, Wei Puccini, Alberto Grothey, Axel George, Thomas J. Hwang, Jimmy J. O'Neil, Bert Barrett, Alexander S. Kadakia, Kunal C. Musselwhite, Laura W. Raghavan, Derek Van Cutsem, Eric Tabernero, Josep Tie, Jeanne JCO Precis Oncol ORIGINAL REPORTS Promising single-agent activity from sotorasib and adagrasib in KRAS(G12C)-mutant tumors has provided clinical evidence of effective KRAS signaling inhibition. However, comprehensive analysis of KRAS-variant prevalence, genomic alterations, and the relationship between KRAS and immuno-oncology biomarkers is lacking. MATERIALS AND METHODS: Retrospective analysis of deidentified records from 79,004 patients with various cancers who underwent next-generation sequencing was performed. Fisher's exact test evaluated the association between cancer subtypes and KRAS variants. Logistic regression assessed KRAS(G12C) comutations with other oncogenes and the association between KRAS variants and immuno-oncology biomarkers. RESULTS: Of the 79,004 samples assessed, 13,758 (17.4%) harbored KRAS mutations, with 1,632 (11.9%) harboring KRAS(G12C) and 12,126 (88.1%) harboring other KRAS variants (KRAS(non-G12C)). Compared with KRAS(non-G12C) across all tumor subtypes, KRAS(G12C) was more prevalent in females (56% v 51%, false discovery rate-adjusted P value [FDR-P] = .0006), current or prior smokers (85% v 56%, FDR-P < .0001), and patients age > 60 years (73% v 63%, FDR-P ≤ .0001). The most frequent KRAS variants across all subtypes were G12D (29.5%), G12V (23.0%), G12C (11.9%), G13D (6.5%), and G12R (6.2%). KRAS(G12C) was most prevalent in patients with non–small-cell lung cancer (9%), appendiceal (3.9%), colorectal (3.2%), tumor of unknown origin (1.6%), small bowel (1.43%), and pancreatic (1.3%) cancers. Compared with KRAS(non-G12C)-mutated, KRAS(G12C)-mutated tumors were significantly associated with tumor mutational burden-high status (17.9% v 8.4%, odds ratio [OR] = 2.38; FDR-P < .0001). KRAS(G12C)-mutated tumors exhibited a distinct comutation profile from KRAS(non-G12C)-mutated tumors, including higher comutations of STK11 (20.59% v 5.95%, OR = 4.10; FDR-P < .01) and KEAP1 (15.38% v 4.61%, OR = 3.76; FDR-P < .01). CONCLUSION: This study presents the first large-scale, pan-cancer genomic characterization of KRAS(G12C). The KRAS(G12C) mutation was more prevalent in females and older patients and appeared to be associated with smoking status. KRAS(G12C) tumors exhibited a distinct comutation profile and were associated with tumor mutational burden-high status. Wolters Kluwer Health 2022-03-23 /pmc/articles/PMC8966967/ /pubmed/35319967 http://dx.doi.org/10.1200/PO.21.00245 Text en © 2022 by American Society of Clinical Oncology https://creativecommons.org/licenses/by/4.0/Licensed under the Creative Commons Attribution 4.0 License: http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) |
spellingShingle | ORIGINAL REPORTS Salem, Mohamed E. El-Refai, Sherif M. Sha, Wei Puccini, Alberto Grothey, Axel George, Thomas J. Hwang, Jimmy J. O'Neil, Bert Barrett, Alexander S. Kadakia, Kunal C. Musselwhite, Laura W. Raghavan, Derek Van Cutsem, Eric Tabernero, Josep Tie, Jeanne Landscape of KRAS(G12C), Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers |
title | Landscape of KRAS(G12C), Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers |
title_full | Landscape of KRAS(G12C), Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers |
title_fullStr | Landscape of KRAS(G12C), Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers |
title_full_unstemmed | Landscape of KRAS(G12C), Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers |
title_short | Landscape of KRAS(G12C), Associated Genomic Alterations, and Interrelation With Immuno-Oncology Biomarkers in KRAS-Mutated Cancers |
title_sort | landscape of kras(g12c), associated genomic alterations, and interrelation with immuno-oncology biomarkers in kras-mutated cancers |
topic | ORIGINAL REPORTS |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8966967/ https://www.ncbi.nlm.nih.gov/pubmed/35319967 http://dx.doi.org/10.1200/PO.21.00245 |
work_keys_str_mv | AT salemmohamede landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT elrefaisherifm landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT shawei landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT puccinialberto landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT grotheyaxel landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT georgethomasj landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT hwangjimmyj landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT oneilbert landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT barrettalexanders landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT kadakiakunalc landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT musselwhitelauraw landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT raghavanderek landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT vancutsemeric landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT tabernerojosep landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers AT tiejeanne landscapeofkrasg12cassociatedgenomicalterationsandinterrelationwithimmunooncologybiomarkersinkrasmutatedcancers |