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Accumulation-depuration data collection in support of toxicokinetic modelling

Regulatory bodies require bioaccumulation evaluation of chemicals within organisms to better assess toxic risks. Toxicokinetic (TK) data are particularly useful in relating the chemical exposure to the accumulation and depuration processes happening within organisms. TK models are used to predict in...

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Autores principales: Ratier, Aude, Charles, Sandrine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8967850/
https://www.ncbi.nlm.nih.gov/pubmed/35354827
http://dx.doi.org/10.1038/s41597-022-01248-y
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author Ratier, Aude
Charles, Sandrine
author_facet Ratier, Aude
Charles, Sandrine
author_sort Ratier, Aude
collection PubMed
description Regulatory bodies require bioaccumulation evaluation of chemicals within organisms to better assess toxic risks. Toxicokinetic (TK) data are particularly useful in relating the chemical exposure to the accumulation and depuration processes happening within organisms. TK models are used to predict internal concentrations when experimental data are lacking or difficult to access, such as within target tissues. The bioaccumulative property of chemicals is quantified by metrics calculated from TK model parameters after fitting to data collected via bioaccumulation tests. In bioaccumulation tests, internal concentrations of chemicals are measured within organisms at regular time points during accumulation and depuration phases. The time course is captured by TK model parameters thus providing bioaccumulation metrics. But raw TK data remain difficult to access, most often provided within papers as plots. To increase availability of TK data, we developed an innovative database from data extracted in the scientific literature to support TK modelling. Freely available, our database can dynamically evolve thanks to any researcher interested in sharing data to be findable, accessible, interoperable and reusable.
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spelling pubmed-89678502022-04-20 Accumulation-depuration data collection in support of toxicokinetic modelling Ratier, Aude Charles, Sandrine Sci Data Data Descriptor Regulatory bodies require bioaccumulation evaluation of chemicals within organisms to better assess toxic risks. Toxicokinetic (TK) data are particularly useful in relating the chemical exposure to the accumulation and depuration processes happening within organisms. TK models are used to predict internal concentrations when experimental data are lacking or difficult to access, such as within target tissues. The bioaccumulative property of chemicals is quantified by metrics calculated from TK model parameters after fitting to data collected via bioaccumulation tests. In bioaccumulation tests, internal concentrations of chemicals are measured within organisms at regular time points during accumulation and depuration phases. The time course is captured by TK model parameters thus providing bioaccumulation metrics. But raw TK data remain difficult to access, most often provided within papers as plots. To increase availability of TK data, we developed an innovative database from data extracted in the scientific literature to support TK modelling. Freely available, our database can dynamically evolve thanks to any researcher interested in sharing data to be findable, accessible, interoperable and reusable. Nature Publishing Group UK 2022-03-30 /pmc/articles/PMC8967850/ /pubmed/35354827 http://dx.doi.org/10.1038/s41597-022-01248-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
Ratier, Aude
Charles, Sandrine
Accumulation-depuration data collection in support of toxicokinetic modelling
title Accumulation-depuration data collection in support of toxicokinetic modelling
title_full Accumulation-depuration data collection in support of toxicokinetic modelling
title_fullStr Accumulation-depuration data collection in support of toxicokinetic modelling
title_full_unstemmed Accumulation-depuration data collection in support of toxicokinetic modelling
title_short Accumulation-depuration data collection in support of toxicokinetic modelling
title_sort accumulation-depuration data collection in support of toxicokinetic modelling
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8967850/
https://www.ncbi.nlm.nih.gov/pubmed/35354827
http://dx.doi.org/10.1038/s41597-022-01248-y
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